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CAZyme Information: MGYG000000272_02247
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Prevotella hominis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella hominis | |||||||||||
| CAZyme ID | MGYG000000272_02247 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 116; End: 2116 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 88 | 428 | 3.1e-48 | 0.9076923076923077 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam00295 | Glyco_hydro_28 | 1.37e-21 | 151 | 428 | 50 | 307 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| COG5434 | Pgu1 | 1.61e-21 | 48 | 388 | 73 | 448 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN02218 | PLN02218 | 4.90e-20 | 52 | 390 | 61 | 390 | polygalacturonase ADPG |
| PLN03003 | PLN03003 | 1.15e-18 | 50 | 375 | 15 | 315 | Probable polygalacturonase At3g15720 |
| PLN02188 | PLN02188 | 4.83e-16 | 55 | 429 | 33 | 379 | polygalacturonase/glycoside hydrolase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QNT65232.1 | 0.0 | 1 | 666 | 1 | 668 |
| QEC72689.1 | 1.89e-65 | 49 | 463 | 51 | 439 |
| BAV07348.1 | 1.20e-59 | 17 | 463 | 5 | 432 |
| QEC57624.1 | 1.66e-43 | 48 | 447 | 30 | 416 |
| AYD47266.1 | 1.94e-43 | 48 | 447 | 28 | 414 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1BHE_A | 4.98e-17 | 66 | 419 | 20 | 374 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P18192 | 2.56e-16 | 66 | 419 | 46 | 400 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
| P26509 | 3.42e-16 | 66 | 419 | 46 | 400 | Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000379 | 0.998153 | 0.000890 | 0.000191 | 0.000182 | 0.000157 |