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CAZyme Information: MGYG000000273_00816

You are here: Home > Sequence: MGYG000000273_00816

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola coprophilus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprophilus
CAZyme ID MGYG000000273_00816
CAZy Family GH2
CAZyme Description Evolved beta-galactosidase subunit alpha
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1348 MGYG000000273_6|CGC1 150700.24 6.3645
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000273 3492533 Isolate China Asia
Gene Location Start: 32351;  End: 36397  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000273_00816.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 68 1008 4.3e-206 0.973404255319149
CBM32 1217 1343 3.6e-28 0.9112903225806451

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 0.0 39 1127 2 1004
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 0.0 39 1095 15 999
beta-galactosidase.
COG3250 LacZ 1.09e-123 71 1006 5 804
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
smart01038 Bgal_small_N 6.92e-83 823 1120 1 272
Beta galactosidase small chain. This domain comprises the small chain of dimeric beta-galactosidases EC:3.2.1.23. This domain is also found in single chain beta-galactosidase.
pfam02836 Glyco_hydro_2_C 2.62e-76 415 689 8 300
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRO23809.1 0.0 1 1348 1 1348
QQT44022.1 0.0 22 1348 29 1348
QMV69371.1 0.0 22 1348 29 1348
QRQ61601.1 0.0 22 1348 29 1348
QQT52765.1 0.0 22 1348 29 1348

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 1.01e-184 40 1121 3 980
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 1.04e-184 40 1121 4 981
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3DEC_A 1.77e-175 40 1126 6 1000
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3BGA_A 1.58e-169 40 1126 9 1004
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
3MUY_1 7.72e-115 39 1119 14 1019
Chain1, Beta-D-galactosidase [Escherichia coli K-12],3MUY_2 Chain 2, Beta-D-galactosidase [Escherichia coli K-12],3MUY_3 Chain 3, Beta-D-galactosidase [Escherichia coli K-12],3MUY_4 Chain 4, Beta-D-galactosidase [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 5.69e-184 40 1121 4 981
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847 2.39e-181 40 1123 19 1034
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q9K9C6 1.22e-150 47 1119 16 1008
Beta-galactosidase OS=Alkalihalobacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) OX=272558 GN=lacZ PE=3 SV=1
P06864 9.83e-148 41 1127 4 1004
Evolved beta-galactosidase subunit alpha OS=Escherichia coli (strain K12) OX=83333 GN=ebgA PE=1 SV=4
A1SWB8 4.32e-138 39 1096 11 1008
Beta-galactosidase OS=Psychromonas ingrahamii (strain 37) OX=357804 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002846 0.995101 0.001214 0.000334 0.000246 0.000219

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000273_00816.