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CAZyme Information: MGYG000000273_01877

You are here: Home > Sequence: MGYG000000273_01877

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola coprophilus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprophilus
CAZyme ID MGYG000000273_01877
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
935 MGYG000000273_18|CGC1 105778.05 5.3773
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000273 3492533 Isolate China Asia
Gene Location Start: 43956;  End: 46763  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000273_01877.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 22 496 1.3e-71 0.5093085106382979

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 2.12e-25 25 543 12 509
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10150 PRK10150 2.60e-19 24 343 11 296
beta-D-glucuronidase; Provisional
pfam02837 Glyco_hydro_2_N 3.88e-12 27 218 3 169
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
PRK10340 ebgA 4.18e-12 26 445 42 449
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK09525 lacZ 4.07e-10 20 361 44 371
beta-galactosidase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRO25183.1 0.0 1 935 1 935
QUT75482.1 0.0 12 930 10 931
AQT69150.1 0.0 6 935 11 943
ATP55310.1 0.0 9 932 14 953
SCD20884.1 0.0 15 918 14 928

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3DYO_A 1.39e-18 20 459 46 475
ChainA, Beta-galactosidase [Escherichia coli K-12],3DYO_B Chain B, Beta-galactosidase [Escherichia coli K-12],3DYO_C Chain C, Beta-galactosidase [Escherichia coli K-12],3DYO_D Chain D, Beta-galactosidase [Escherichia coli K-12],3DYP_A Chain A, Beta-galactosidase [Escherichia coli K-12],3DYP_B Chain B, Beta-galactosidase [Escherichia coli K-12],3DYP_C Chain C, Beta-galactosidase [Escherichia coli K-12],3DYP_D Chain D, Beta-galactosidase [Escherichia coli K-12]
1F4A_A 2.40e-18 20 459 44 473
E.COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_B E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_C E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_D E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4H_A E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_B E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_C E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_D E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli]
3MUY_1 2.41e-18 20 459 46 475
Chain1, Beta-D-galactosidase [Escherichia coli K-12],3MUY_2 Chain 2, Beta-D-galactosidase [Escherichia coli K-12],3MUY_3 Chain 3, Beta-D-galactosidase [Escherichia coli K-12],3MUY_4 Chain 4, Beta-D-galactosidase [Escherichia coli K-12]
3J7H_A 2.41e-18 20 459 47 476
Structureof beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],3J7H_B Structure of beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],3J7H_C Structure of beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],3J7H_D Structure of beta-galactosidase at 3.2-A resolution obtained by cryo-electron microscopy [Escherichia coli K-12],4CKD_A Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],4CKD_B Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],4CKD_C Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],4CKD_D Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4. [Escherichia coli K-12],6DRV_A Beta-galactosidase [Escherichia coli K-12],6DRV_B Beta-galactosidase [Escherichia coli K-12],6DRV_C Beta-galactosidase [Escherichia coli K-12],6DRV_D Beta-galactosidase [Escherichia coli K-12]
7BRS_A 2.41e-18 20 459 48 477
ChainA, Beta-galactosidase [Escherichia coli K-12],7BRS_B Chain B, Beta-galactosidase [Escherichia coli K-12],7BRS_C Chain C, Beta-galactosidase [Escherichia coli K-12],7BRS_D Chain D, Beta-galactosidase [Escherichia coli K-12],7BTK_A Chain A, Beta-galactosidase [Escherichia coli K-12],7BTK_B Chain B, Beta-galactosidase [Escherichia coli K-12],7BTK_C Chain C, Beta-galactosidase [Escherichia coli K-12],7BTK_D Chain D, Beta-galactosidase [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7ZI91 1.00e-17 20 459 47 476
Beta-galactosidase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) OX=331111 GN=lacZ PE=3 SV=1
A7ZWZ1 1.00e-17 20 459 47 476
Beta-galactosidase OS=Escherichia coli O9:H4 (strain HS) OX=331112 GN=lacZ PE=3 SV=1
Q8VNN2 1.32e-17 20 459 52 481
Beta-galactosidase OS=Escherichia coli OX=562 GN=lacZ PE=3 SV=1
P00722 1.32e-17 20 459 47 476
Beta-galactosidase OS=Escherichia coli (strain K12) OX=83333 GN=lacZ PE=1 SV=2
B7N8Q1 2.28e-17 20 459 47 476
Beta-galactosidase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) OX=585056 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000004 0.003529 0.996489 0.000001 0.000002 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000273_01877.