logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000273_01944

You are here: Home > Sequence: MGYG000000273_01944

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola coprophilus
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprophilus
CAZyme ID MGYG000000273_01944
CAZy Family GT5
CAZyme Description Glycogen synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
275 31485.78 4.7541
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000273 3492533 Isolate China Asia
Gene Location Start: 58936;  End: 59763  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000273_01944.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 5 231 8.1e-43 0.4555084745762712

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08323 Glyco_transf_5 2.09e-52 6 241 1 222
Starch synthase catalytic domain.
PRK14098 PRK14098 1.81e-45 5 176 7 179
starch synthase.
cd03791 GT5_Glycogen_synthase_DULL1-like 1.35e-34 5 225 1 212
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
PRK00654 glgA 1.74e-25 5 175 2 153
glycogen synthase GlgA.
COG0297 GlgA 7.75e-25 5 175 2 164
Glycogen synthase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QRO25341.1 4.38e-205 1 275 1 275
ADY34869.1 7.88e-178 1 273 1 273
QDO69344.1 4.55e-152 3 269 4 269
ALJ61464.1 7.51e-151 3 269 4 269
QUT92962.1 7.51e-151 3 269 4 269

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RZU_A 3.03e-08 6 194 3 181
ChainA, Glycogen synthase 1 [Agrobacterium tumefaciens],1RZU_B Chain B, Glycogen synthase 1 [Agrobacterium tumefaciens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B3EGV0 5.62e-42 5 231 7 241
Glycogen synthase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803 / 6330) OX=290315 GN=glgA PE=3 SV=1
B4SC83 5.62e-42 5 214 7 223
Glycogen synthase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) OX=324925 GN=glgA PE=3 SV=1
Q3B6C3 2.14e-40 5 235 7 242
Glycogen synthase OS=Chlorobium luteolum (strain DSM 273 / BCRC 81028 / 2530) OX=319225 GN=glgA PE=3 SV=1
A1BIY8 5.77e-40 5 214 7 223
Glycogen synthase OS=Chlorobium phaeobacteroides (strain DSM 266) OX=290317 GN=glgA PE=3 SV=1
A4SCU9 8.06e-38 5 214 7 223
Glycogen synthase OS=Chlorobium phaeovibrioides (strain DSM 265 / 1930) OX=290318 GN=glgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999586 0.000398 0.000039 0.000002 0.000001 0.000014

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000273_01944.