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CAZyme Information: MGYG000000278_03314
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA3402 sp003478355 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UBA3402; UBA3402 sp003478355 | |||||||||||
| CAZyme ID | MGYG000000278_03314 | |||||||||||
| CAZy Family | PL22 | |||||||||||
| CAZyme Description | Oligogalacturonate lyase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 194; End: 1366 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL22 | 174 | 372 | 6.6e-21 | 0.9187817258883249 |
| PL22 | 33 | 147 | 1.9e-17 | 0.41132075471698115 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam14583 | Pectate_lyase22 | 1.44e-24 | 13 | 389 | 14 | 386 | Oligogalacturonate lyase. This is a family of oligogalacturonate lyases, referred to more generally as pectate lyase family 22. These proteins fold into 7-bladed beta-propellers. |
| COG0823 | TolB | 1.76e-06 | 11 | 102 | 263 | 344 | Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport]. |
| PRK00178 | tolB | 2.73e-06 | 21 | 105 | 278 | 352 | Tol-Pal system protein TolB. |
| PRK04922 | tolB | 2.23e-04 | 21 | 105 | 283 | 357 | Tol-Pal system beta propeller repeat protein TolB. |
| COG0823 | TolB | 7.35e-04 | 4 | 102 | 211 | 300 | Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking, secretion, and vesicular transport]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QQR02694.1 | 1.26e-254 | 1 | 389 | 1 | 367 |
| ANU48417.1 | 1.26e-254 | 1 | 389 | 1 | 367 |
| SET71872.1 | 7.10e-183 | 1 | 387 | 1 | 384 |
| AJQ29048.1 | 7.88e-131 | 1 | 384 | 1 | 381 |
| AGK03506.1 | 4.66e-126 | 11 | 385 | 7 | 383 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3PE7_A | 2.81e-25 | 13 | 389 | 14 | 386 | Oligogalacturonatelyase in complex with manganese [Yersinia enterocolitica subsp. enterocolitica 8081] |
| 3C5M_A | 7.03e-24 | 13 | 388 | 14 | 385 | Crystalstructure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_B Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633],3C5M_C Crystal structure of oligogalacturonate lyase (VPA0088) from Vibrio parahaemolyticus. Northeast Structural Genomics Consortium Target VpR199 [Vibrio parahaemolyticus RIMD 2210633] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q59418 | 1.89e-23 | 3 | 389 | 4 | 386 | Oligogalacturonide lyase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=ogl PE=4 SV=2 |
| P21258 | 6.56e-23 | 3 | 389 | 4 | 386 | Oligogalacturonate lyase OS=Dickeya dadantii (strain 3937) OX=198628 GN=ogl PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999958 | 0.000081 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |