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CAZyme Information: MGYG000000279_01023

You are here: Home > Sequence: MGYG000000279_01023

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Veillonella sp003463825
Lineage Bacteria; Firmicutes_C; Negativicutes; Veillonellales; Veillonellaceae; Veillonella; Veillonella sp003463825
CAZyme ID MGYG000000279_01023
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
560 MGYG000000279_21|CGC1 62939.28 9.1132
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000279 2005377 Isolate China Asia
Gene Location Start: 14715;  End: 16397  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000279_01023.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 186 429 1.5e-36 0.7668918918918919

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 5.41e-58 150 429 22 308
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 3.17e-42 5 438 13 422
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
smart00636 Glyco_18 5.32e-25 135 421 6 329
Glyco_18 domain.
pfam00704 Glyco_hydro_18 2.12e-21 201 421 78 302
Glycosyl hydrolases family 18.
cd06549 GH18_trifunctional 6.07e-18 157 430 27 297
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VEG93546.1 0.0 1 560 1 560
BBU34423.1 0.0 1 560 1 560
BBU36194.1 0.0 1 484 1 484
CAB1275696.1 0.0 1 560 1 560
SNU97803.1 0.0 1 560 1 560

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CZ8_A 4.47e-18 194 422 73 307
ChainA, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168],3CZ8_B Chain B, Putative sporulation-specific glycosylase ydhD [Bacillus subtilis subsp. subtilis str. 168]
4WIW_A 1.23e-16 155 430 35 336
ChainA, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_B Chain B, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_C Chain C, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_D Chain D, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_E Chain E, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2],4WIW_F Chain F, Glycoside hydrolase family 18 [Desulfitobacterium hafniense DCB-2]
4S3K_A 7.59e-16 206 426 190 415
ChainA, Spore germination protein YaaH [Priestia megaterium QM B1551]
4S3J_A 9.83e-15 193 424 172 411
Crystalstructure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876],4S3J_B Crystal structure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876],4S3J_C Crystal structure of the Bacillus cereus spore cortex-lytic enzyme SleL [Bacillus cereus ATCC 10876]
3AQU_A 6.23e-11 214 432 94 336
Crystalstructure of a class V chitinase from Arabidopsis thaliana [Arabidopsis thaliana],3AQU_B Crystal structure of a class V chitinase from Arabidopsis thaliana [Arabidopsis thaliana],3AQU_C Crystal structure of a class V chitinase from Arabidopsis thaliana [Arabidopsis thaliana],3AQU_D Crystal structure of a class V chitinase from Arabidopsis thaliana [Arabidopsis thaliana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O05495 8.75e-18 194 422 165 399
Putative sporulation-specific glycosylase YdhD OS=Bacillus subtilis (strain 168) OX=224308 GN=ydhD PE=1 SV=2
O31682 6.67e-17 155 359 27 226
Putative glycosylase YkvQ OS=Bacillus subtilis (strain 168) OX=224308 GN=ykvQ PE=3 SV=1
P37531 4.05e-16 193 424 169 409
Cortical fragment-lytic enzyme OS=Bacillus subtilis (strain 168) OX=224308 GN=sleL PE=1 SV=2
P0DPJ9 9.51e-15 193 424 171 410
Cortical fragment-lytic enzyme OS=Bacillus anthracis OX=1392 GN=sleL PE=2 SV=1
Q9K3E4 2.99e-14 193 424 171 410
Cortical fragment-lytic enzyme OS=Bacillus cereus OX=1396 GN=sleL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000417 0.998599 0.000368 0.000241 0.000189 0.000160

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000279_01023.