CAZyme Information: MGYG000000280_01228

Basic Information

• Species: AM51-8 sp003478275
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; AM51-8; AM51-8 sp003478275
• CAZyme ID: MGYG000000280_01228
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
847		95131.31	4.6454

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000280	2599910	Isolate	China	Asia

• Gene Location: Start: 433092; End: 435635 Strand: +

Full Sequence      

MKAIRLRCEQMENPLGIDVQKPCLSWICQDGIHQTAYEIEAKTGEDVIYNSGKVASDSMN
VMLDADLASKQQVVWHVRLWDEKDVCGEWSQDAHFEMGIIKADQFVAKWINPEGQINTDE
MQPVSYLRKTFTFDGNAKDARAYVSAHGIYEVRINGKRVGDFVLAPGTSSYDKQMPYQTY
DVTELLENGENTITAEVADGWYRSYSGVDGDRNLFGTELAFFFQLENAGQVICISDETWE
VSQAGPLRQADMQMGEVYDANKEDITDWHGVSVVDADNSLFKATNSVPVQEHEHFEGKIM
TTPNGETVIDYGQNLAGYICFTLEAHEGDRLVLTHGEALDENGNFTAENFQDRKRHKGGG
TEQKVTFICKEGTNTYHTKFSIWGFQYAKVETDIDLSTAHFESIAVYSAMEQIGHFSCGN
ADVNQLVHNSIWSQKSNFCDVPTDCPTRERAAWTGDAGVFVDTGIFLEDCYSIFRKWLGE
CRLMQYDDGKIANIAPLNSKPSFFSGLLSGSTGWGDACIIVPYALYKRYDDVRILEENYD
MMKKWYAFLEDRAKKKDIKKIFKKKSPYRDYTIETGIDYGEWCEPGVDSASLMGKTPVDS
ATAYFAHSGKMLSEIAQILGHEDEAKHYAEVSEKATLAFRDAATENGKIIGERQAPYVRA
IAFDLLTEEDKKQAVEDLNALVVKNDYHLNTGFLSTPFLCQVLAENGHTDTAYRLLLQDT
APSWLYEVKKGANTVWETWDGINEKGEVHASLNHYSYGAICGWLFGGVCGIHLENKHVTI
HPYPDASLGYAHAEYVSPVGKIVSAWKYEGDNIHYTFEIPANVTAEVYLEDGQKVTLEAG
KHEIVSK

Enzyme Prediction     

No EC number prediction in MGYG000000280_01228.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	299	829	5.8e-144	0.998015873015873
CBM67	107	275	1.7e-26	0.8977272727272727

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	2.42e-101	411	768	1	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	8.73e-46	138	293	4	172	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592	Bac_rhamnosid	5.45e-15	301	407	2	102	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	3.03e-14	776	844	10	77	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
PRK10340	ebgA	6.55e-04	80	202	71	185	cryptic beta-D-galactosidase subunit alpha; Reviewed

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CBL02680.1	0.0	1	842	1	869
AXB29247.1	0.0	1	842	1	869
AHF25957.1	2.42e-310	11	823	1	811
QQD65395.1	4.78e-302	1	847	1	883
QTE67956.1	1.05e-300	107	842	13	747

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6GSZ_A	3.78e-112	9	843	10	862	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
3W5M_A	1.31e-107	140	829	319	994	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6I60_A	5.40e-107	6	829	35	898	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KNB2	4.37e-151	9	838	42	887	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03	1.31e-118	9	826	38	875	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
Q82PP4	5.67e-107	140	829	319	994	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KPL4	1.74e-80	13	837	42	914	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000059	0.000001	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000280_01228.