CAZyme Information: MGYG000000284_00241

Basic Information

• Species: Parabacteroides sp900540715
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides; Parabacteroides sp900540715
• CAZyme ID: MGYG000000284_00241
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1204	MGYG000000284_2|CGC5	136973.1	6.6646

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000284	5935659	MAG	Sweden	Europe

• Gene Location: Start: 98592; End: 102206 Strand: +

Full Sequence      

MKKLFILILCIFSQFLSSQVKQLPPGHPDRSATMDLKKGFATPPKGYGEVPFYWWMGDTL
TRKHLTYHLDQMAAKKVTSLQVNYAHSDKGGVSYGLTFPSRPALFTEEWWDLFGWFMGEA
KKRNMTVSLSDYTLGVGQGSYVDDALKENPELTGAELKFESDTIQGNYEKACHENLLSLY
AYQLGADNIIIENSGIDLTKNFTDNKIQWQSPEGKWIVTQVYSAAKKPSLDPMHPLSGKS
YVKHFFQRFEDRFPEQSKGGLNFFFSDELNFNLHGCIWNSIFRDEFRKRKGYDVIPYLAA
LFTHIGSITPKIRLDYNDVMVSLSEENFFIPVYQWHEDRNLIYGCDHGGRGRDVSEFGDY
FRTQRWNQAPGCDQPNFSKDIIKNKVASSIAHLYERPRVWLEGFHSSKWDSNTANVTDAI
FANFAMGQNLLSLHGFFYSTVGGWWEWAPPCNHTHMPYWEQMGPLLECSERLSYVLSQGY
HRADIAILYPVEPVVAGYGNDAVEKAFSLGDFLYKKGIDFDFMDYQSLDKATVKNGKLHI
SGEEFKVLIIPSMKAIRHSSLEKALKFKQNGGIIINLGDLPEATEKKGLNDTRVNTLLDK
LFKTSGNNVFIATDNKEILHILDSHLTRDFRITSREDKQDEPYIMHRKIAGKELYAVYNV
PKDTECFFRATGGIELWDPWTGTFREISASSITDEGTCIRMPLNKQDMHIFVFDPDRKAT
ISAPVEHKVKETIVLDGEWAFELKPTLDNRFGDFHWPATPEILGAYIYKARYLQSSKATD
GWQSPSFDDDGWTSKTFTFAPRFMLLEATPELTEELIFSNLPGKSEGIIAGNKEYRWKPY
EFSWRWGVENDYGHQGWHGLKATVHDEFIRLGEFKQEFRETQRVENPSGNKNYYLYSNVL
APEAGTYQLSLGELKPAAVYINGKQIEDLSGSILLKEGLNEIVLHYDTFGVTWCVIRKQG
DTPRIIKEATAEKPLATNFRGDRSILPFDIRQTQEATYGQYRFKSAPGLDKFVFSAFGKP
EVWVDGKACLLDIKRKRPDGCITYEATIPNPNKRVSTVAIRIEEEWGNTGGAAIDGPIRQ
ICGEGLIAAGDWSQIEGISTYSGGAWYRKNIQLKDIANNQRVHLNLGKVISTAEVWINGK
KVGLKLTAPWQFDITDHVKTGDNKIEVLIHNTAANYYLSVPTQYRGKTTAGLLGTVSIDI
TENR

Enzyme Prediction     

No EC number prediction in MGYG000000284_00241.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	36	747	1.8e-87	0.8264563106796117

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	2.02e-26	196	688	354	870	alpha-L-rhamnosidase.
pfam02837	Glyco_hydro_2_N	1.58e-06	1094	1178	56	142	Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
PRK10150	PRK10150	5.51e-05	1091	1172	53	137	beta-D-glucuronidase; Provisional
PRK10340	ebgA	1.46e-04	1107	1178	113	186	cryptic beta-D-galactosidase subunit alpha; Reviewed
pfam08531	Bac_rhamnosid_N	8.47e-04	730	792	101	147	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BBL01784.1	0.0	1	1202	1	1202
BBL12449.1	0.0	1	1202	1	1202
BBL09655.1	0.0	1	1202	1	1202
QGY44259.1	0.0	1	1198	4	1194
QGQ95144.1	0.0	24	1200	29	1237

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQM_A	3.45e-09	1091	1175	972	1059	Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A	3.45e-09	1091	1175	972	1059	Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]
6D89_A	1.57e-07	1086	1171	81	168	Bacteroidesuniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_B Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_C Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis],6D89_D Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion [Bacteroides uniformis]
6D1N_A	1.58e-07	1086	1171	89	176	Apostructure of Bacteroides uniformis Beta-glucuronidase 1 [Bacteroides uniformis],6D1N_B Apo structure of Bacteroides uniformis Beta-glucuronidase 1 [Bacteroides uniformis],6D41_A Bacteriodes uniformis beta-glucuronidase 1 bound to D-glucaro-1,5-lactone [Bacteroides uniformis],6D41_B Bacteriodes uniformis beta-glucuronidase 1 bound to D-glucaro-1,5-lactone [Bacteroides uniformis],6D6W_A Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate [Bacteroides uniformis],6D6W_B Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate [Bacteroides uniformis],6D6W_C Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate [Bacteroides uniformis],6D6W_D Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate [Bacteroides uniformis],6D7F_A Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide [Bacteroides uniformis],6D7F_B Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide [Bacteroides uniformis],6D7F_C Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide [Bacteroides uniformis],6D7F_D Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide [Bacteroides uniformis],6D7F_E Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide [Bacteroides uniformis],6D7F_F Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide [Bacteroides uniformis]
7VQM_A	3.22e-06	1090	1171	80	163	ChainA, GH2 beta-galacturonate AqGalA [Aquimarina sp.],7VQM_B Chain B, GH2 beta-galacturonate AqGalA [Aquimarina sp.],7VQM_C Chain C, GH2 beta-galacturonate AqGalA [Aquimarina sp.],7VQM_D Chain D, GH2 beta-galacturonate AqGalA [Aquimarina sp.]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KNA8	5.61e-27	35	1175	29	1093	Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.004506	0.991754	0.002998	0.000275	0.000232	0.000235

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000284_00241.