CAZyme Information: MGYG000000286_00325

Basic Information

• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274
• CAZyme ID: MGYG000000286_00325
• CAZy Family: GH0
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
419		47654.51	4.2345

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000286	1017072	MAG	Sweden	Europe

• Gene Location: Start: 113; End: 1372 Strand: +

Full Sequence      

MSNKDINILQNEENNVGYLKFGIFDMTVAKPLEGAQVVVSDGTENLTTLFTDESGQTPVI
SLKTPPLEYSLEPDMPTPYSTYNAIITADGYETEEIEGIQVYTNNQSIQEVYMKPILSTN
QPKEVIVIPPPTIYGDYPNKIPEAEEKELPKESGFVVLDRVVIPEFIVVHDGDPNDNTAP
NYWVPYKDYIKNVASSEIFSTWPDAAIRANILAINSFTLNRVYTEWYRSRGKNFTITNST
RFDQFFVEGRNIFEEINIIVDEMFTTYIKRPNQRQPLLTQYCDGKRVICPNWLSQWGSKY
LAEDGYSTLQILRYYYGNDIFLDNAEKVSGVPSSYPGYPLELGSSGEDVRTIQNQLNSIS
NNYPAINKLRADGIFGDQTRTAVLTFQQIFNMPQSGIVDFSTWYEISKVFVAVERIAEL

Enzyme Prediction     

No EC number prediction in MGYG000000286_00325.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam01471	PG_binding_1	1.15e-12	345	403	1	54	Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409	PGRP	3.96e-09	327	406	108	183	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409	PGRP	8.94e-08	339	403	38	99	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
TIGR02669	SpoIID_LytB	9.42e-06	293	316	237	260	SpoIID/LytB domain. This model describes a domain found typically in two or three proteins per genome in Cyanobacteria and Firmicutes, and sporadically in other genomes. One member is SpoIID of Bacillus subtilis. Another in B. subtilis is the C-terminal half of LytB, encoded immediately upstream of an amidase, the autolysin LytC, to which its N-terminus is homologous. Gene neighborhoods are not well conserved for members of this family, as many, such as SpoIID, are monocistronic. One early modelling-based study suggests a DNA-binding role for SpoIID, but the function of this domain is unknown. [Unknown function, General]
pfam13620	CarboxypepD_reg	0.001	31	113	13	81	Carboxypeptidase regulatory-like domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QOX64963.1	1.30e-166	17	419	14	418
QEI32542.1	2.02e-156	9	419	16	429
QHB25032.1	2.02e-156	9	419	16	429
QUO33025.1	1.09e-155	12	419	7	417
QRT31086.1	1.24e-155	9	419	18	431

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000050	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000286_00325.