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CAZyme Information: MGYG000000287_00539

You are here: Home > Sequence: MGYG000000287_00539

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900539655
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900539655
CAZyme ID MGYG000000287_00539
CAZy Family GH141
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2274 248743.05 4.7464
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000287 7249439 MAG Sweden Europe
Gene Location Start: 59;  End: 6883  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000287_00539.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH141 44 592 1.2e-54 0.9886148007590133

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5492 YjdB 1.45e-20 1714 1906 144 324
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG5492 YjdB 3.34e-17 1481 1644 178 329
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG5492 YjdB 2.47e-16 1832 1994 177 326
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG5492 YjdB 6.73e-16 1516 1728 130 324
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam02368 Big_2 5.00e-15 1486 1561 2 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWW32784.1 6.73e-112 42 802 30 755
QWG02190.1 1.17e-51 1481 2098 322 904
QWG06295.1 9.67e-50 1481 2002 322 892
ANQ50384.1 2.97e-49 1481 2091 322 898
ART28000.1 5.15e-49 1481 2091 322 897

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P33747 1.70e-16 1482 1639 35 190
Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2
P85991 8.78e-12 1829 2002 88 257
Ig-like virion protein OS=Serratia phage KSP90 OX=552528 PE=1 SV=2
A0A3R0A696 2.63e-07 1586 1700 288 399
Alpha-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=blArafA PE=1 SV=1
P35838 3.06e-07 1837 1916 237 316
Uncharacterized protein CA_C0552 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_C0552 PE=4 SV=2
Q086E4 9.61e-07 1449 1903 97 547
Ice-binding protein 1 OS=Shewanella frigidimarina (strain NCIMB 400) OX=318167 GN=Sfri_1018 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.012388 0.939809 0.041628 0.005383 0.000466 0.000286

TMHMM  Annotations      download full data without filtering help

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