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CAZyme Information: MGYG000000287_00705
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Robinsoniella sp900539655 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900539655 | |||||||||||
| CAZyme ID | MGYG000000287_00705 | |||||||||||
| CAZy Family | GH29 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 53395; End: 59484 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH29 | 64 | 393 | 3.5e-59 | 0.861271676300578 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3669 | AfuC | 4.50e-71 | 54 | 529 | 2 | 430 | Alpha-L-fucosidase [Carbohydrate transport and metabolism]. |
| COG5492 | YjdB | 8.23e-27 | 1241 | 1400 | 180 | 328 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
| pfam01120 | Alpha_L_fucos | 1.04e-26 | 106 | 394 | 83 | 331 | Alpha-L-fucosidase. |
| smart00812 | Alpha_L_fucos | 6.28e-26 | 106 | 390 | 80 | 327 | Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. |
| COG5492 | YjdB | 9.43e-22 | 1278 | 1488 | 133 | 329 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QRT29448.1 | 0.0 | 2 | 1242 | 11 | 1251 |
| QHB23055.1 | 0.0 | 2 | 1242 | 11 | 1251 |
| QEI30547.1 | 0.0 | 2 | 1242 | 11 | 1251 |
| PLT74914.1 | 0.0 | 17 | 1242 | 20 | 1247 |
| QPK81604.1 | 7.02e-298 | 24 | 996 | 20 | 1001 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6TR3_A | 1.41e-211 | 55 | 578 | 20 | 552 | Ruminococcusgnavus GH29 fucosidase E1_10125 in complex with fucose [[Ruminococcus] gnavus E1] |
| 6TR4_A | 2.04e-210 | 55 | 578 | 20 | 552 | Ruminococcusgnavus GH29 fucosidase E1_10125 D221A mutant in complex with fucose [[Ruminococcus] gnavus E1],6TR4_B Ruminococcus gnavus GH29 fucosidase E1_10125 D221A mutant in complex with fucose [[Ruminococcus] gnavus E1] |
| 6ORG_A | 5.79e-108 | 58 | 530 | 6 | 449 | Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORG_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4] |
| 6OR4_A | 6.62e-107 | 58 | 530 | 6 | 449 | Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6OR4_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_A Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORH_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4] |
| 6ORF_A | 6.83e-107 | 58 | 530 | 6 | 449 | Crystalstructure of SpGH29 [Streptococcus pneumoniae TIGR4],6ORF_B Crystal structure of SpGH29 [Streptococcus pneumoniae TIGR4] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q8GW72 | 3.53e-85 | 56 | 529 | 31 | 477 | Alpha-L-fucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=FUC1 PE=1 SV=2 |
| Q7XUR3 | 1.12e-78 | 53 | 532 | 30 | 479 | Putative alpha-L-fucosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0560400 PE=3 SV=2 |
| P85991 | 8.54e-17 | 1688 | 1841 | 105 | 257 | Ig-like virion protein OS=Serratia phage KSP90 OX=552528 PE=1 SV=2 |
| P33747 | 9.91e-16 | 1257 | 1406 | 51 | 201 | Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2 |
| Q086E4 | 3.24e-12 | 1276 | 1855 | 79 | 665 | Ice-binding protein 1 OS=Shewanella frigidimarina (strain NCIMB 400) OX=318167 GN=Sfri_1018 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.001223 | 0.995015 | 0.000743 | 0.002459 | 0.000290 | 0.000229 |
