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CAZyme Information: MGYG000000287_01216

You are here: Home > Sequence: MGYG000000287_01216

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900539655
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900539655
CAZyme ID MGYG000000287_01216
CAZy Family GH27
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
817 MGYG000000287_10|CGC4 90862.15 7.576
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000287 7249439 MAG Sweden Europe
Gene Location Start: 87553;  End: 90006  Strand: -

Full Sequence      Download help

MVSTGLRDAG  YEYVVVDDGY  LEDRRDEVDG  NLVPNASKFP  NGFKEVSDYV  HERGLKYGMY60
NSSGTYTCGR  LPGSWGHEEA  DARTFTEWGV  DYFKYDFCFN  PLVIRVPDYT  DFAPDIDKLL120
IYDSDNNIVK  EVEAESGKLE  GGATNDGYEN  KVVGYIGTSG  GKVTLDVPME  QGGDYRLGIV180
YVSAEKRNIC  VDINGFKESK  ACPPTSGWEL  SDSKTLELPV  TLNAGDNQIQ  LYLNNDDIAQ240
NNERYAYESY  KKMSDAFDDA  GANILFNICE  WGENNPWKWG  PEVGHCWRTT  TDITFSPGQA300
KWDNDENGSS  IMQIYDKNVI  LDEYAGPYHY  NDPDMLAVGL  NGLNDQENVS  HFSLWCMMAS360
PLIIGCDPSN  TDANTLRAIE  ILSNKELIAI  NQDELGIQAK  RYRDDGDLEY  LVKPLANGDV420
ALLMLNRSSQ  TQNMSADIGE  AASAKEFEGQ  ENFVNAGSYS  VKELWTEETI  NVTDTIQASV480
PSHGVKVYRI  TEDKPEQFKI  TWDANGGTPD  PQVTTVTDGN  AIGKLAQVTR  EGYEFKGWYT540
DRTEGTKVTA  ETIVTGNMTL  FAHWKEAAKA  KYKIMFNSNG  GAQKPSVLTR  EAGSMYGALP600
AVTRDGYKFL  GWYNGSKKVS  QTDLVTNNVT  LTAKWEKNPI  ALPGKFTVKA  KSQTTSSLKL660
AWSKSPNAVS  YKVSRYDSKL  KKWKQLKTTT  GNSFKDTKLK  AGTKYKYRIT  ALNKENEENT720
VTITTAAKPG  RPKLTVKISG  KSATLSWKRI  AADKVVVYMK  KGNGSYIKVA  QRPAKTRKFI780
KSNLKKGTVY  KFKVKAYVKA  GSAIYSKYSA  VKTVRVK817

Enzyme Prediction      help

No EC number prediction in MGYG000000287_01216.

CAZyme Signature Domains help

Created with Snap4081122163204245285326367408449490531571612653694735776232469GH27
Family Start End Evalue family coverage
GH27 232 469 9.2e-63 0.8908296943231441

CDD Domains      download full data without filtering help

Created with Snap40811221632042452853263674084494905315716126536947357761393GH271491PLN028081488PLN026921491PLN022291393Melibiase_2
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd14792 GH27 3.30e-93 1 393 27 271
glycosyl hydrolase family 27 (GH27). GH27 enzymes occur in eukaryotes, prokaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-N-acetylgalactosaminidase, and 3-alpha-isomalto-dextranase. All GH27 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH27 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.
PLN02808 PLN02808 2.11e-81 1 491 58 384
alpha-galactosidase
PLN02692 PLN02692 7.55e-74 1 488 82 406
alpha-galactosidase
PLN02229 PLN02229 1.01e-67 1 491 89 418
alpha-galactosidase
pfam16499 Melibiase_2 6.65e-49 1 393 38 284
Alpha galactosidase A.

CAZyme Hits      help

Created with Snap40811221632042452853263674084494905315716126536947357761495AQS55991.1|GH271491QIK51342.1|GH271490AHH94654.1|GH271496ARF54252.1|GH272510AOR37584.1|CBM13|GH27
Hit ID E-Value Query Start Query End Hit Start Hit End
AQS55991.1 4.14e-111 1 495 72 537
QIK51342.1 6.57e-83 1 491 72 606
AHH94654.1 7.77e-76 1 490 62 386
ARF54252.1 4.66e-74 1 496 76 407
AOR37584.1 5.11e-74 2 510 75 419

PDB Hits      download full data without filtering help

Created with Snap408112216320424528532636740844949053157161265369473577614911UAS_A14916F4C_B24294OGZ_A24344NZJ_A14923A5V_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
1UAS_A 3.62e-62 1 491 35 360
ChainA, alpha-galactosidase [Oryza sativa]
6F4C_B 4.42e-58 1 491 35 361
Nicotianabenthamiana alpha-galactosidase [Nicotiana benthamiana]
4OGZ_A 1.72e-49 2 429 127 422
Crystalstructure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution [Bacteroides fragilis NCTC 9343],4OGZ_B Crystal structure of a putative alpha-galactosidase/melibiase (BF4189) from Bacteroides fragilis NCTC 9343 at 2.00 A resolution [Bacteroides fragilis NCTC 9343]
4NZJ_A 2.26e-48 2 434 127 427
Crystalstructure of a putative alpha-galactosidase (BF1418) from Bacteroides fragilis NCTC 9343 at 1.57 A resolution [Bacteroides fragilis NCTC 9343]
3A5V_A 2.82e-46 1 492 35 392
Crystalstructure of alpha-galactosidase I from Mortierella vinacea [Umbelopsis vinacea]

Swiss-Prot Hits      download full data without filtering help

Created with Snap40811221632042452853263674084494905315716126536947357761491sp|B3PGJ1|AGAL_CELJU1494sp|Q8RX86|AGAL2_ARATH1491sp|P14749|AGAL_CYATE1491sp|Q9FXT4|AGAL_ORYSJ1488sp|Q9FT97|AGAL1_ARATH
Hit ID E-Value Query Start Query End Hit Start Hit End Description
B3PGJ1 3.75e-69 1 491 59 402
Alpha-galactosidase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=agaA PE=1 SV=1
Q8RX86 5.63e-66 1 494 66 395
Alpha-galactosidase 2 OS=Arabidopsis thaliana OX=3702 GN=AGAL2 PE=1 SV=1
P14749 2.03e-61 1 491 82 408
Alpha-galactosidase OS=Cyamopsis tetragonoloba OX=3832 PE=1 SV=1
Q9FXT4 8.65e-61 1 491 90 415
Alpha-galactosidase OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0493600 PE=1 SV=1
Q9FT97 9.16e-59 1 488 80 404
Alpha-galactosidase 1 OS=Arabidopsis thaliana OX=3702 GN=AGAL1 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000069 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000287_01216.