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CAZyme Information: MGYG000000287_01231

You are here: Home > Sequence: MGYG000000287_01231

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900539655
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900539655
CAZyme ID MGYG000000287_01231
CAZy Family GH3
CAZyme Description Beta-glucosidase BoGH3B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
801 MGYG000000287_11|CGC1 87227.08 4.7965
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000287 7249439 MAG Sweden Europe
Gene Location Start: 16640;  End: 19045  Strand: -

Full Sequence      Download help

MNQSYRNTQL  SSEKRAELLL  QEMNIEEKLA  QLTCFLPAKD  RMEEVKEKCK  IGIGEISTLE60
MRNIESLEAV  ADFQRDVQKI  IMEQSRHHIP  AIFHMEGLCG  AFIQEAVSFP  AGIARGSSWD120
VELEEKIAKV  VSRQERAVGI  THTLAPVLDV  ARDPRMGRQG  ESYGEDAALV  SAMGAAYTRG180
IQQGESAGRK  SEAVAKHFLG  SHHTQGGIHG  THLEIPDRLL  REVYAKPFQA  AISESGLKGI240
MPCYCSLDGE  PASASAKLLT  GLLRDEMKFD  GVTVSDYSAI  SNILEVQHVC  ESYTDAGEQS300
LLAGMDVETP  NRMAFNNELL  IRLQNSEKGI  KRLDEAVLGV  LAAKFRMGLF  ENPYALNGQE360
LKQTFLAGDE  EEIALQAARE  SLILLKNNGI  LPLKGGIKKI  AVIGCHAENA  RVFFGDYTHL420
SMASAVLAVA  NSIAGIGESG  TAGNKDAVLI  SGTQVQSDET  EEFMELLNLQ  KPNVLSLLDQ480
LKKDLPNVEI  SSAYGYPAAG  SDESGYGKAL  EIAAAADLVI  MTLGGRYCSC  SIATMGEGVD540
SSDINLPACQ  EHFIREAAKL  GKPMVGVHFN  GRPISSDTAD  ECLDAILEAW  APAEGGAKAI600
SEVLLGAFNP  CGKLPVSVAY  HTGQLPVYYN  HPWGSAWHTG  RSIGFQDYVD  LPHTPRYCFG660
YGMSYTQFEY  SALHIQAKEV  SPDETIMITC  EVKNTGSVDG  TEVVQLYISD  SYASLQRPVK720
ELAGFARVTL  MAGEKKQVKF  TVEPGQLAFL  DKDMRWKIEA  GEFRVMIGSS  SEDIHLEDCF780
AITDSLFIEG  NERGFYAKVE  G801

Enzyme Prediction      help

No EC number prediction in MGYG000000287_01231.

CAZyme Signature Domains help

Created with Snap408012016020024028032036040044048052056060064068072076082309GH3
Family Start End Evalue family coverage
GH3 82 309 1.2e-58 0.9861111111111112

CDD Domains      download full data without filtering help

Created with Snap408012016020024028032036040044048052056060064068072076019775PRK1509823409BglX25341Glyco_hydro_37744PLN03080382665Glyco_hydro_3_C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK15098 PRK15098 8.47e-131 19 775 41 758
beta-glucosidase BglX.
COG1472 BglX 8.62e-84 23 409 1 366
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 2.92e-58 25 341 2 314
Glycosyl hydrolase family 3 N terminal domain.
PLN03080 PLN03080 8.34e-57 7 744 44 744
Probable beta-xylosidase; Provisional
pfam01915 Glyco_hydro_3_C 1.06e-35 382 665 1 216
Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.

CAZyme Hits      help

Created with Snap40801201602002402803203604004404805205606006406807207605798AJG98232.1|GH35798VCV22852.1|GH35798CBL11432.1|GH35798QRT50982.1|GH35798AIQ70324.1|GH3
Hit ID E-Value Query Start Query End Hit Start Hit End
AJG98232.1 0.0 5 798 8 802
VCV22852.1 0.0 5 798 8 813
CBL11432.1 0.0 5 798 8 813
QRT50982.1 0.0 5 798 8 813
AIQ70324.1 0.0 5 798 8 802

PDB Hits      download full data without filtering help

Created with Snap4080120160200240280320360400440480520560600640680720760177745XXL_A177745XXN_A57745YOT_A57747EAP_A177745TF0_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
5XXL_A 1.74e-96 17 774 15 744
Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
5XXN_A 9.16e-96 17 774 15 744
CrystalStructure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXN_B Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXO_A Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482],5XXO_B Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482]
5YOT_A 2.93e-91 5 774 7 748
Isoprimeverose-producingenzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YOT_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_A Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40]
7EAP_A 2.13e-90 5 774 7 748
ChainA, Fn3_like domain-containing protein [Aspergillus oryzae RIB40]
5TF0_A 5.90e-90 17 774 14 743
CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]

Swiss-Prot Hits      download full data without filtering help

Created with Snap408012016020024028032036040044048052056060064068072076068772sp|T2KMH0|PLH24_FORAG2773sp|T2KMH9|PLH34_FORAG19771sp|Q56078|BGLX_SALTY19771sp|P33363|BGLX_ECOLI20774sp|A7LXU3|BGH3B_BACO1
Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KMH0 2.36e-102 68 772 48 711
Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
T2KMH9 5.39e-101 2 773 26 746
Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
Q56078 2.94e-94 19 771 41 754
Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
P33363 5.81e-93 19 771 41 754
Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
A7LXU3 6.31e-73 20 774 43 768
Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000086 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000287_01231.