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CAZyme Information: MGYG000000287_01268

You are here: Home > Sequence: MGYG000000287_01268

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900539655
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900539655
CAZyme ID MGYG000000287_01268
CAZy Family GH141
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
789 MGYG000000287_11|CGC2 89239.5 5.1298
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000287 7249439 MAG Sweden Europe
Gene Location Start: 76025;  End: 78394  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000287_01268.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH141 6 528 7.8e-61 0.9867172675521821

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00987 PDZ_serine_protease 6.04e-06 678 766 5 90
PDZ domain of trypsin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind C-terminal polypeptides, though binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of protease-associated PDZ domains a C-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in Eumetazoan signaling proteins.
pfam13229 Beta_helix 2.77e-05 296 444 21 155
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229 Beta_helix 3.94e-05 299 526 1 156
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
COG0265 DegQ 1.96e-04 691 765 263 335
Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AWW32784.1 1.54e-144 7 760 34 789
AFZ35556.1 6.58e-39 4 645 46 705
BAU63437.1 7.54e-36 1 636 52 682
AWV97657.1 2.10e-34 2 646 25 704
AEE97817.1 2.58e-34 7 672 442 1124

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000041 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000287_01268.