logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000287_02469

You are here: Home > Sequence: MGYG000000287_02469

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900539655
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900539655
CAZyme ID MGYG000000287_02469
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1395 155257.88 5.0168
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000287 7249439 MAG Sweden Europe
Gene Location Start: 17417;  End: 21604  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000287_02469.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 39 765 2.4e-59 0.6407766990291263
CBM32 782 898 1.9e-17 0.9274193548387096

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 4.52e-38 43 758 1 777
alpha-L-rhamnosidase.
COG5492 YjdB 2.15e-19 1070 1300 106 329
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
COG5492 YjdB 9.11e-16 1021 1212 149 325
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam02368 Big_2 1.26e-13 1143 1219 1 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
pfam02368 Big_2 2.84e-12 1321 1389 8 75
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI61176.1 2.59e-208 34 1045 30 1043
QGA23530.1 9.83e-128 42 1045 25 731
QGT72311.1 4.15e-126 40 1044 25 723
BCG54873.1 1.51e-121 42 1044 25 749
AWW28862.1 3.39e-105 32 1043 25 752

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P33747 2.45e-11 1144 1325 39 217
Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2
P85991 1.15e-08 1080 1221 116 257
Ig-like virion protein OS=Serratia phage KSP90 OX=552528 PE=1 SV=2
A0A3R0A696 1.14e-07 1154 1222 284 352
Alpha-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=blArafA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.265411 0.644116 0.088295 0.001042 0.000507 0.000601

TMHMM  Annotations      download full data without filtering help

start end
5 24