CAZyme Information: MGYG000000287_02536

Basic Information

• Species: Robinsoniella sp900539655
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900539655
• CAZyme ID: MGYG000000287_02536
• CAZy Family: GH127
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1694	MGYG000000287_34|CGC2	188119.87	4.722

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000287	7249439	MAG	Sweden	Europe

• Gene Location: Start: 49133; End: 54217 Strand: -

Full Sequence      

MRKVLKKTMSVVLAASLLAGSVGAVDAAEVKNKSARRGNADYVSNQGELITTPFVQLPVG
AVRASGWLENQLLLQKVNLTGNMHLFNDYNQATSAWLGAENGESWERGPYYMRGLVALAY
VLDDEELKAEAQMWVEAILESQREDGSFGAGSKTDWWAKMPVLMAMRDYYEATEAAGETD
ERVIPFMESYFRYQAAALPNNHLSNWADARGGDNIDSVYWLYNRLYNEADPQSTNWLLDL
GNILEEQTTDWTGQYNDTTVRQHVVNTSQGMKTPAVYYQYSKNDADKNALQNGLLNMSVD
HGRVDGLPNSDEAARDNRSTRGTENCGIVEGLLSSEIAEKVLGEAWIGDRIEKLAYNALP
AAYTPDMSGHVYYVLQNQVMATLGNHEFDCDHGDSSAFGAPLGFDCCYSNTHMGWPKFVQ
NMWMATENNGLALTAYGPNQVTAKVADGKTAEFVQQTDYPFKDAIHLDYKGDTVDFELQL
RIPEWTVDPVVKVNDTVVQGVVNGEYYKVDREWKKGDTIDLVFPSEIETSSWYNDSVAVE
KGPLLYGLKIEEDWRVEESNDARELKVEHQEQSPLREVYPASQWNYGLVVEDGFEVSYAD
EVALQPFSTQTAPVTIKATGQLIPEWTYDGNIAGPQPYGATPADESLQTDIELIPYGSGR
LRISQFPAIGEPYTDVVKAEGDSSKIKHLGNIYQEFKNIIVPAAQNYILTVEGSGQGEVI
VNNKGKVSVDLTLGSATLEGLKTLISDGNFKFTNGHFNNLRFTEGLQVDRLVVTPVSMEI
TDINIESYSRTDDYIKINTNLNAQETPYELLYKTTEEGDFTNSIIGFESQSAYITGIDPT
LDYYVQIVAKVHGEDKASDVIVLKAEEVNGGGLKPNPGAPNAQYSGFTTLNYMEDGSAGW
VKYDPANNIRYIQDENIGRTVAKIGKNERVKMTYEPADGSGQNWTDYVVTGTVSVDEMSN
NNAGIIFRGSNFGDDPDAYAGYFAGIGRVDYNDGNVHGLGLMIGYADGQWHDIKGFSMPE
LQTNTKYDIKVVAFGDQFAVYLKAHNDADYDFIAKFSDSRFSKGTIGFRSYNEAFTAYGV
DVRPVVQEDLGVFEETEEEPGEKPNEVLFTDDFSDAQKSQENWLKVPNQADIQFVDEKVL
LGSSTDMKLVTAEPYQWTDFVYEADVTLRGEGQNAGLIFRSSKEESGADSYNGYYFGIGY
GKGKGSFEVGKATDKKWNGISGTVESELVKPDQAHHLMVIAYGSKLNFFIDGAKVYSIAD
SSHKIGRVGLRGYNRQFEVDNIQVRTLTEEEKEIYSKIEVEEFDITAESFQDGFQITYPK
TAAASYKVQYGTEPGVYTNEFVDVKFNNYKGGGVFTKDKVAFGVPLVGTYYFRLVGLSSG
QIVVAESNELMMDTEYREDTSANAQRLEETKTLVSGTDTSKARPADLARMKTAIADAEAL
QEATGNQMDYDLASSLLTISKYAIDNRVAEPTNPEEPEEPKETEPEETEKPQETEKPQET
EKPVGPVKPVEPSKPVKKNQTISAKNISKIYGAKPFKLNVKTNGDGKLSYKSDNKKVVTI
SSSGKVTVKNYGKAKITIKASATGKYNEASKTITFEVRPKKAVISKVSAAGKGRMKVTWK
KDSRVTGYQIVYARNSKFTKGKKYVSVKNAKTITKTVSKLKKGTKYFVKVRSYKTVKNHK
YYSSYSKMKTVKIN

Enzyme Prediction     

No EC number prediction in MGYG000000287_02536.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH127	341	546	3.6e-24	0.3893129770992366
CBM66	1139	1282	4.7e-22	0.8774193548387097

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	1.19e-41	110	546	62	502	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	5.76e-16	306	568	270	522	Uncharacterized conserved protein, DUF1680 family [Function unknown].
pfam06439	DUF1080	1.66e-07	1149	1285	44	182	Domain of Unknown Function (DUF1080). This family has structural similarity to an endo-1,3-1,4-beta glucanase belonging to glycoside hydrolase family 16. However, the structure surrounding the active site differs from that of the endo-1,3-1,4-beta glucanase.
cd00063	FN3	2.18e-05	1606	1692	8	92	Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
smart00060	FN3	6.01e-04	1606	1673	8	77	Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QNF30112.1	1.82e-143	43	724	29	740
ALL07583.1	9.97e-137	39	685	25	667
QPH39723.1	3.34e-136	45	672	29	652
QJE95537.1	8.69e-134	54	674	40	653
AOM80627.1	1.94e-133	42	672	22	648

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQO_A	1.63e-10	54	549	129	609	Glycosidehydrolase BT_1003 [Bacteroides thetaiotaomicron]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000397	0.998702	0.000233	0.000252	0.000203	0.000173

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000287_02536.