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CAZyme Information: MGYG000000287_02539

You are here: Home > Sequence: MGYG000000287_02539

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900539655
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900539655
CAZyme ID MGYG000000287_02539
CAZy Family CBM67
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2217 MGYG000000287_35|CGC1 243824.69 4.6935
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000287 7249439 MAG Sweden Europe
Gene Location Start: 1218;  End: 7871  Strand: +

Full Sequence      Download help

MKLRRRLLSC  ILATAVTVTS  ITPITAAASQ  GSMQIGSLKV  NYLSEPLGID  DAQPVFSWIL60
ASDGYDKGQS  AYRIIVSSTR  EGAEKHEGDV  WDSGKTENEN  NYNITYQGST  LLSRTPYYWA120
VQVWDEDGNE  TGWSEVSSFE  TGIMSADEWN  GEWVGIKNTD  MNFQGANWIW  RRDGSDFSGA180
PEGIQYFRKG  FRTDKAKTIS  NVNIGITADD  EYELYVNGQK  AGENGGVDSW  KNGKLYDVTN240
LISAEGENVI  AASAHNTSRG  YAGLLAKIEV  LYNDGTKDTY  VTDNTWKLSK  TNEAGWSGKD300
YDDSKWIAPD  QSEPYGNSPW  NSGVSPNAEN  AFAATVLRKE  FKTEKGAIKD  AKAYVSGLGF360
FELKINGQLP  DDTLLNPANT  QYNQTSLYRV  FDVTKLVKEG  KNAIGVELGN  SFYNETCSVW420
NWQDAKWRDA  PKLRMEIEIE  YENGEKESVV  TDESWKATKE  GPITTNSIYY  GETYDARKEL480
NGFDLINYDD  TNWGAVQLMD  APEGKLKAQI  MEPIRRTKEM  QPSDITKLDN  GSYVLTIPEM540
LAGWIKLDIK  GAGAGDKVTI  TYGEKLNADG  QVQKLGGKDG  VNSGWWPRAY  NQQDNYICKG600
GSDVETFEPK  FSYKGYQYVQ  IDGYPSELTA  DDVICYRVSN  DMEDTGSFES  SDELFNKMHQ660
MMITTMKNNM  QGKPTDTPVW  EKNGWLGDAN  VALETMTYNF  GFVNMLKQFV  ETMEDCQNEF720
DNVPNMVPTQ  GWGNDNTVVW  NSIFVFGVDQ  MIDTYGNESY  LYEQYDAMRK  LALKDMEESR780
KNGWTWSDGQ  LADWVSPMGQ  GDDDQDLKYS  ESPSEGSGIC  GTAFAYHLLD  VMADLADRIG840
KTEDAAEYRA  AMEKMYKAFN  EKFYDAENQI  YRTLTWSQQQ  NRSRYRQTSQ  LVPLAYGLVP900
EEYKEGVVTN  LVNDIKDKNY  HLDTGCVGSK  FILPVLTDNG  YADVAYKVAQ  QKSYPSWGFM960
AERGTSLWEM  WETTSRSLGH  YFLGTYDEWF  YKGVGGIKEM  QDGYQTVTIE  PALNESLTYA1020
KAGVSTVRGQ  LQSNWTLNED  QGTFDIQVPV  GTTAEIILPN  NDKGQITCNG  QLLSENLDGI1080
HTVSEEDGKV  HIKAGSGSYQ  FETKVKLTSI  EKIKLKKAIL  DAGSLKQLDY  EMDAWTEFKA1140
VLDEASELNS  NPDAVQEEVD  AMVLKLTDAT  AELKLHVNKS  REALKEAVKN  ADEKANPVAV1200
PVKYADAYQE  AYDAAKAGCT  DVSLTNEQMD  QLVVDLAEAE  TTMNSHSFQN  LALNGKVAYS1260
TSHEDNYWGW  GSKLINDGDR  KNINKDGEYT  GYSSNTGDAK  EKDHEEWVSI  DLGKVQDINA1320
VAIYPAIKNA  SEKNSGYGFP  KNFEIQVSEN  GKDWTAVISK  ENYPVPSYEP  VSFTFESTNA1380
KYVKLFAKNL  NPKSNDHDFY  YLQLSEFEVY  HSENIIEDIE  LTSYVAPKST  AVYGEPLVDM1440
SDIKASINGK  VDITGKWTVE  NQDGTTVDLK  NKPETGKYNV  KLTFQAPYTY  IFSDILAGTA1500
DDGAKVTVES  NGQKLVYSYL  TEVVKAAAPV  VEDQKMYFVY  AAGGNGQISI  ADLMKQYQPI1560
VKYAVGNVSD  DHKILASDIT  VDENGLLSFS  VNTNGEIDQN  AVIPVTVAMK  NYEDTVVNVC1620
IILTDKIPLT  VHSSVENVIY  TGNPYEGLEI  PSAEITETGE  PYTGEFIITY  NTEDGNAPVK1680
EGNYTVTVVP  ADAAYVGQWT  GSFTISPALQ  TVTAGIESPE  LFWDETTQIT  GVAAIGSDGN1740
KMDLAGAEIS  YSSEDTNIAV  VDENGKVSAR  NAGSTKIIVT  IAIGDMVKAG  EAAVTVSEIP1800
AVNPVLASKT  TTSVTLETAE  GYEYAVQKGN  EEPVFSRIAE  FKDLEPATSY  VFLQRIAATD1860
THNAGSVSEA  LEVLTDKEKI  QGTIIINGNT  KEGEKLTLDT  TGIRNKKPGD  LSIVWKRGNQ1920
EIKEVNSTTY  TLTKADVGYK  ISAVVTAKNL  EGSLTAVTAS  NVLPAVTPPP  AKVEVDKITL1980
NRSSVSIMKK  KTVKLTANIF  PSNASDMSVT  FKSSKPSVAS  VDKNGKVTGK  KAGKAVITAT2040
ASNGKSASCK  ITVTTDPTKI  KLNTNKKTLG  RKETYTLKTT  LVPSTAVTSK  IKFTSSNKKV2100
ATVDKKGRVK  AVKEGTAVIT  VKTANGKKAT  CDITVRKAPS  SIKLNVGKSK  SLKKGKTLKL2160
KVTRSTGSAG  NITFISKNDK  VATVSSSGKI  KALKKGRAKI  IAETYNGKKA  EVVIIVK2217

Enzyme Prediction      help

No EC number prediction in MGYG000000287_02539.

CAZyme Signature Domains help

Created with Snap11022133244355466577588699711081219133014411551166217731884199521065251058GH78166320CBM67332502CBM6712601407CBM32
Family Start End Evalue family coverage
GH78 525 1058 1.2e-138 0.998015873015873
CBM67 166 320 3.3e-34 0.9943181818181818
CBM67 332 502 1.5e-31 0.8920454545454546
CBM32 1260 1407 9e-18 0.9354838709677419

CDD Domains      download full data without filtering help

Created with Snap1102213324435546657758869971108121913301441155116621773188419952106643994Bac_rhamnosid6H346518Bac_rhamnosid_N19032131YjdB526639Bac_rhamnosid197322Bac_rhamnosid_N
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 2.52e-90 643 994 1 340
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531 Bac_rhamnosid_N 6.06e-59 346 518 1 172
Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
COG5492 YjdB 1.84e-20 1903 2131 110 329
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam05592 Bac_rhamnosid 2.94e-20 526 639 1 102
Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531 Bac_rhamnosid_N 4.17e-15 197 322 1 149
Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.

CAZyme Hits      help

Created with Snap1102213324435546657758869971108121913301441155116621773188419952106331410BCI59736.1|CBM67|GH78311101QYJ14959.1|CBM67|GH78891101AQS56111.1|CBM67|GH78311104SDU74751.1|CBM67|GH78261101AZM64016.1|CBM67|GH78
Hit ID E-Value Query Start Query End Hit Start Hit End
BCI59736.1 0.0 33 1410 39 1406
QYJ14959.1 3.21e-243 31 1101 35 1079
AQS56111.1 1.19e-236 89 1101 14 1014
SDU74751.1 1.26e-213 31 1104 44 1089
AZM64016.1 5.45e-208 26 1101 31 1080

PDB Hits      download full data without filtering help

Created with Snap11022133244355466577588699711081219133014411551166217731884199521063211053W5M_A3811016I60_A33710596GSZ_A1564626T0Q_A1564626T1D_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3W5M_A 3.01e-146 32 1105 3 1032
CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6I60_A 1.78e-133 38 1101 35 939
Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
6GSZ_A 6.57e-85 337 1059 134 847
Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
6T0Q_A 6.27e-10 156 462 18 317
PleurotusOstreatus Lectin (POL), apo form [Pleurotus ostreatus]
6T1D_A 6.40e-10 156 462 21 320
PleurotusOstreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_B Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_C Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_D Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_E Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_F Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap1102213324435546657758869971108121913301441155116621773188419952106321101sp|Q82PP4|RHA78_STRAW301100sp|T2KPL4|PLH28_FORAG461107sp|T2KNB2|PLH20_FORAG3221059sp|P9WF03|RHA78_ALTSL6161071sp|T2KM26|PLH36_FORAG
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q82PP4 4.15e-145 32 1101 3 1028
Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KPL4 3.82e-114 30 1100 27 946
Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
T2KNB2 4.42e-98 46 1107 47 926
Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03 1.64e-72 322 1059 158 879
Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KM26 1.40e-14 616 1071 700 1149
Bifunctional sulfatase/alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22250 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001280 0.983328 0.000414 0.014314 0.000351 0.000269

TMHMM  Annotations      download full data without filtering help

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