CAZyme Information: MGYG000000287_03105

Basic Information

• Species: Robinsoniella sp900539655
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900539655
• CAZyme ID: MGYG000000287_03105
• CAZy Family: GH146
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
2151		236232.68	4.7581

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000287	7249439	MAG	Sweden	Europe

• Gene Location: Start: 38247; End: 44702 Strand: +

Full Sequence      

MGKKKVLWKKLLSGFLAVTMVAGSIAPIQADAKTSDTREEAERTLLYFVDAGDHDVTTVS
EGDEFGAWNTVTDQVLGEDPGTGKMWGIDDPGGEVSSETYPDTGVYTKYTWANEQLTDDG
VSKDLSFRYGRNQNESGFQELYVDYKFELQAGKTYDVEVGVGNNWGNSSPVEVYANKGES
GEQHIGSSGDIPKQGNAVVKGEATADEDGYLSIDVRKSDVVKGKTINLNWIRIYTSDSIQ
DEDLELQLKFDGNVSDTSGKDLPIALTGSENYIEGMNGNALQLDGKAYLNLGNSASLQPS
MLTAAFWVKAPESLGKGEHIIMWAKPNGNYAGEGWYLSSLSDTVPLKLSVGTSVGGGQPM
EISVEDDRDQFFPVDEWVYVTVTYDSEAGEACIYRNGVAQEVKYNSKGNKINGNGTDSKY
LGFNSPKYNGGFAKLAFDDFEIYSHCAAAEEVSALYHRYGGIFTDEEIVDKDLALLNPFV
NSDTLVHDVALPDTGRNGSAITWSSSREDVISNQGQVVRPNPGEEDAQVILTASVTYGEV
TKTKEFTLLVTAQTENQLYVSYDMTVQDGMLVDKQGRCNALLAGMNESNVITDENGEKKL
NFTGNKSQYVKIPSGILEDGDESITIEVKFNTSQMDFAWLYNLGTKDTNNYVFLNPIRAG
GEVAFTLKAGGKSEQSVNIGGAVKPGEDTTATMVFSEDQIAKLYINGKLAGTTKHGYNLS
DILKNGVKNPADAIGYMGLSLYGNDPGYIGTISYFDVYNYAMSDQEVWQNYADKNLDMTD
EDRIAEDFKALKLTEGELTKDFLELPKMGLNGSSILWESSNTDVISTDGTVNRPKAGEKD
AEVILKAALSLGNLTKSKSFRFLVLADTDITGIEEFALGAVDVTNDYYDQVTEKDIAFLK
EFDADRLLSRFRETAGLSTLNKQPYIGWEDSYIGGHTLGHYLTACAQAYLTAEKEEDRTW
MKERLAYLIQELEECQEAVGTGFIFGAKIEDRNNIEKQFDIMEGKTGGANWVPWYTMHKI
LAGLVDVFKFTGDEKALKTASSLGDWIYNRTSKWDTATQRRVLNIEYGGMNDCLYELYKY
SGKEEHAKAAHMFDEDTLFENVLAGTPNILNGKHANTTIPKFLGALNRYRALEGKTINGE
EQDASLYLEYAEAFWDMVIERHTYITGGNSEWEHFGADNILDAERTQCNCETCNTYNMLK
MTRELFKITGNKKYSDYYENTFLNAIMSSINPDTGMTTYFQPMAAGYFKVYADTNINNNQ
FWCCTGSGMENFTKLGDSIYFYKDRTLFVNQYLSSELTWDENHIKLTQNTSIPETDTSEF
TVSLLNGADKAEMNLRLAVPSWVAGTPVVKVNGADQKAETAGGYICIDRTWEDGDTVSVQ
LPMEVRAYTLPDNDGVYAFKYGPVVLSAELGTDDKMDLTTCGVAVSIPKTKVVGSESASP
KDGKRAVLGTETIDIDEYTVDDFMENINRYMVKTVGEDGNLAFKLEGTDHDLTFSTHYLQ
HTQRYGIYWYFTGADSSAEDQQAVILKQKEEGRANQAKIDVIKAGYGQYENDNIHQLDDN
NGAGSVGGSDEAVNGMTTRYAKPGGYFTYRMIVNKEKKNYILCNLAKIDNGKTLKVTAGD
QVIYQEKLNYTGKDAVYEMKIEIPEDAVEKAQSITVDDTATGTQKTYDVVPLKFEGAVNE
ASARLVEEMYISTSYSKNAYLVSLTPNVGTVEMKEDSCLITVPKETQEVGLTAKLADTYG
LLYVNDILVNDSAVQKIVLEGDKTDTSLRVYAEDHETYKDYAVTIERKDVPVEPEEVLVS
QILPGWSQKTMVTGESTLIDAKVLPENAANKNLKYQSGNEKVAMVSGNKITAVAPGTAVI
TVSATDGSGVKATLSVTVKAPAPKPVPVKGITLNPTAKTVTVGESFTLQTQITPADASNK
NVTCTSSNTKAVTANGNQIVAKEPGQSVITVTAQDGSGVKASMTVTVKLAVPGKVKAVQS
GAEKVKVSWSKSSKAIKYNVYRSTKAKSGYRKIKTVTSSSYTDRKVSTGKTYYYKVLAVA
SSGSYNSTSSSAVKVALLKAPSIKVKSAKKGRMDISWKKISGAAGYEVYVSADKSKGYKK
KATVKKQKTVKTTVKGLKSGKKYFVKIKAYRMVDKKKVYGSYSKIKGITIK

Enzyme Prediction     

No EC number prediction in MGYG000000287_03105.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH146	881	1407	1.3e-175	0.9960238568588469

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07944	Glyco_hydro_127	5.41e-126	880	1407	1	503	Beta-L-arabinofuranosidase, GH127. One member of this family, from Bidobacterium longicum, UniProtKB:E8MGH8, has been characterized as an unusual beta-L-arabinofuranosidase enzyme, EC:3.2.1.185. It rleases l-arabinose from the l-arabinofuranose (Araf)-beta1,2-Araf disaccharide and also transglycosylates 1-alkanols with retention of the anomeric configuration. Terminal beta-l-arabinofuranosyl residues have been found in arabinogalactan proteins from a mumber of different plantt species. beta-l-Arabinofuranosyl linkages with 1-4 arabinofuranosides are also found in the sugar chains of extensin and solanaceous lectins, hydroxyproline (Hyp)2-rich glycoproteins that are widely observed in plant cell wall fractions. The critical residue for catalytic activity is Glu-338, in a ET/SCAS sequence context.
COG3533	COG3533	7.11e-94	881	1414	12	508	Uncharacterized conserved protein, DUF1680 family [Function unknown].
COG5492	YjdB	5.79e-12	1832	1977	128	271	Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam13385	Laminin_G_3	2.77e-11	607	767	4	150	Concanavalin A-like lectin/glucanases superfamily. This domain belongs to the Concanavalin A-like lectin/glucanases superfamily.
COG5492	YjdB	5.08e-11	1807	1956	189	324	Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ANY68649.1	3.29e-253	245	1788	47	1212
CBL17203.1	2.59e-243	844	1793	10	939
ADL33431.1	7.09e-229	873	1693	2	779
QSF44176.1	1.63e-215	873	1785	16	858
AIQ16786.1	5.71e-212	873	1785	16	858

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6YQH_AAA	6.11e-90	873	1673	25	802	ChainAAA, Acetyl-CoA carboxylase, biotin carboxylase [Bacteroides thetaiotaomicron VPI-5482]
5OPJ_A	9.02e-86	873	1673	25	802	Beta-L-arabinofuranosidase[Bacteroides thetaiotaomicron]
5HO0_A	8.07e-13	464	767	551	840	Crystalstructure of AbnA (closed conformation), a GH43 extracellular arabinanase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5HO2_A Crystal structure of AbnA (open conformation), a GH43 extracellular arabinanase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5HOF_A Crystal structure of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus, in complex with arabinopentaose [Geobacillus stearothermophilus],5HP6_A Structure of AbnA, a GH43 extracellular arabinanase from Geobacillus stearothermophilus (a new conformational state) [Geobacillus stearothermophilus]
3WRE_A	3.17e-09	1148	1409	294	568	Thecrystal structure of native HypBA1 from Bifidobacterium longum JCM 1217 [Bifidobacterium longum subsp. longum JCM 1217],3WRG_A The complex structure of HypBA1 with L-arabinose [Bifidobacterium longum subsp. longum JCM 1217]
3WKW_A	3.20e-09	1148	1409	294	568	Crystalstructure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum ligand free form [Bifidobacterium longum subsp. longum JCM 1217],3WKX_A Crystal structure of GH127 beta-L-arabinofuranosidase HypBA1 from Bifidobacterium longum arabinose complex form [Bifidobacterium longum subsp. longum JCM 1217],7BZL_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7DIF_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXV_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217],7EXW_A Chain A, Non-reducing end beta-L-arabinofuranosidase [Bifidobacterium longum subsp. longum JCM 1217]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P85991	1.50e-11	1788	1957	76	248	Ig-like virion protein OS=Serratia phage KSP90 OX=552528 PE=1 SV=2
E8MGH8	1.74e-08	1148	1409	294	568	Non-reducing end beta-L-arabinofuranosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA1 PE=1 SV=1
P33747	3.61e-08	1795	1967	33	201	Uncharacterized protein CA_P0160 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=CA_P0160 PE=3 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000295	0.998956	0.000188	0.000209	0.000172	0.000145

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000287_03105.