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CAZyme Information: MGYG000000287_04592

You are here: Home > Sequence: MGYG000000287_04592

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Robinsoniella sp900539655
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Robinsoniella; Robinsoniella sp900539655
CAZyme ID MGYG000000287_04592
CAZy Family GH42
CAZyme Description Beta-galactosidase BglY
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
687 MGYG000000287_102|CGC1 79649.75 6.6928
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000287 7249439 MAG Sweden Europe
Gene Location Start: 8010;  End: 10073  Strand: -

Full Sequence      Download help

MKRNLLFTKV  NEILHGGDYN  PEQWLDRPDI  LVEDIRMMKK  AGVNTVTLGV  FSWSAYEPSE60
GNYHFEWLDE  VMDRLWENGI  YTILATPSGA  RPAWLDQACP  QAMRVNQMGV  RNRHGVRHNH120
CMTSPMYRKK  VREINTMLVK  RYGNHPGLIL  WHISNELGGV  CFCDLCVKKF  QVYLKRKYHD180
NIEELNQEWW  TTFWSHRYNA  FDQIEPPMPG  GETSIQGLNL  DWKRFTTWNM  TDYMRDEIAV240
FKKWTPGIPV  TTNFMRLYEG  LDYHKMSKEL  DIISWDSYPD  WHTDKEELID  TAAGTAFDHS300
IMRSFKRDRP  FMLMESVPSQ  VNWHPYNKLK  RPGVHNLSCM  QAIACGSDTV  QYFQWRKSRG360
SYEQHHGAVV  DHLGRCDTRV  FREVEEVGKN  LKLLQEVQGS  IIKASTAIIF  DWENWWAIND420
MAGLSVEKNY  PRECRRLYQM  LFHHGIDADI  ISQEEELNPY  KVVFAPMLYL  IKPGTEERFR480
RFVEKGGYLA  ATYLTGYVNE  HTLCYLGGFP  GGSLKDLFGL  YTEEIDSLYP  SQSNGAAFTE540
DSKLEGVCRV  RDFCEIIKPI  TALTLAHYTG  DFYQGTPVIT  VNTFGAGKAW  YLGARVEDSG600
LEKLVGKMMC  ELGITFIKLP  HGVEKHIRHH  DGAEYTFYLN  YTMEEKEVRL  GDSETGYSLL660
NQKPVHDSLR  VKGYGVDVIR  TGRYLPD687

Enzyme Prediction      help

EC 3.2.1.23

CAZyme Signature Domains help

Created with Snap346810313717120624027430934337741244648051554958361865218392GH42
Family Start End Evalue family coverage
GH42 18 392 8.5e-150 0.9946091644204852

CDD Domains      download full data without filtering help

Created with Snap346810313717120624027430934337741244648051554958361865213681GanA18394Glyco_hydro_42404614Glyco_hydro_42M406542A4_beta-galactosidase_middle_domain622680Glyco_hydro_42C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1874 GanA 0.0 13 681 16 672
Beta-galactosidase GanA [Carbohydrate transport and metabolism].
pfam02449 Glyco_hydro_42 0.0 18 394 1 376
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
pfam08532 Glyco_hydro_42M 4.24e-71 404 614 1 206
Beta-galactosidase trimerisation domain. This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain is involved in trimerisation.
cd03143 A4_beta-galactosidase_middle_domain 9.12e-30 406 542 1 133
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.
pfam08533 Glyco_hydro_42C 1.24e-06 622 680 1 57
Beta-galactosidase C-terminal domain. This domain is found at the C-terminus of beta-galactosidase enzymes that belong to the glycosyl hydrolase 42 family.

CAZyme Hits      help

Created with Snap34681031371712062402743093433774124464805155495836186521680QOV18628.1|GH421680CBK82608.1|GH426680QUF85286.1|GH426680AOR96158.1|GH426680ANF16247.1|GH42
Hit ID E-Value Query Start Query End Hit Start Hit End
QOV18628.1 5.78e-291 1 680 1 674
CBK82608.1 1.30e-290 1 680 1 675
QUF85286.1 4.15e-252 6 680 7 686
AOR96158.1 8.33e-252 6 680 7 686
ANF16247.1 8.33e-252 6 680 7 686

PDB Hits      download full data without filtering help

Created with Snap346810313717120624027430934337741244648051554958361865286834OIF_A86834OJY_A86835DFA_A56505E9A_A56793TTS_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
4OIF_A 2.56e-226 8 683 10 686
3Dstructure of Gan42B, a GH42 beta-galactosidase from G. [Geobacillus stearothermophilus],4OIF_B 3D structure of Gan42B, a GH42 beta-galactosidase from G. [Geobacillus stearothermophilus],4OIF_C 3D structure of Gan42B, a GH42 beta-galactosidase from G. [Geobacillus stearothermophilus]
4OJY_A 2.65e-226 8 683 11 687
3Dstructure of the E323A catalytic mutant of Gan42B, a GH42 beta-galactosidase from G. stearothermophilus [Geobacillus stearothermophilus],4OJY_B 3D structure of the E323A catalytic mutant of Gan42B, a GH42 beta-galactosidase from G. stearothermophilus [Geobacillus stearothermophilus],4OJY_C 3D structure of the E323A catalytic mutant of Gan42B, a GH42 beta-galactosidase from G. stearothermophilus [Geobacillus stearothermophilus]
5DFA_A 2.07e-225 8 683 10 686
3Dstructure of the E323A catalytic mutant of Gan42B, a GH42 beta-galactosidase from G. stearothermophilus [Geobacillus stearothermophilus],5DFA_B 3D structure of the E323A catalytic mutant of Gan42B, a GH42 beta-galactosidase from G. stearothermophilus [Geobacillus stearothermophilus],5DFA_C 3D structure of the E323A catalytic mutant of Gan42B, a GH42 beta-galactosidase from G. stearothermophilus [Geobacillus stearothermophilus]
5E9A_A 1.49e-221 5 650 31 679
Crystalstructure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3 [Rahnella sp. R3],5E9A_B Crystal structure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3 [Rahnella sp. R3],5E9A_C Crystal structure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3 [Rahnella sp. R3],5E9A_D Crystal structure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3 [Rahnella sp. R3],5E9A_E Crystal structure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3 [Rahnella sp. R3],5E9A_F Crystal structure analysis of the cold-adamped beta-galactosidase from Rahnella sp. R3 [Rahnella sp. R3]
3TTS_A 3.41e-189 5 679 1 672
ChainA, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTS_B Chain B, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTS_C Chain C, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTS_D Chain D, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTS_E Chain E, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTS_F Chain F, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTY_A Chain A, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTY_B Chain B, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTY_C Chain C, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTY_D Chain D, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTY_E Chain E, Beta-galactosidase [Niallia circulans subsp. alkalophilus],3TTY_F Chain F, Beta-galactosidase [Niallia circulans subsp. alkalophilus]

Swiss-Prot Hits      download full data without filtering help

Created with Snap34681031371712062402743093433774124464805155495836186526679sp|C8WV58|BGAL_ALIAD8680sp|Q0TUR6|BGAL_CLOP113662sp|Q65CX4|BGAL2_BACLD13653sp|O07012|BGAL2_BACSU5679sp|Q09HN2|BGAL_PLASL
Hit ID E-Value Query Start Query End Hit Start Hit End Description
C8WV58 5.49e-236 6 679 7 681
Beta-galactosidase BglY OS=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / BCRC 14685 / JCM 5260 / KCTC 1825 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 / 104-IA) OX=521098 GN=bglY PE=1 SV=1
Q0TUR6 1.21e-232 8 680 9 687
Beta-galactosidase Pbg OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=pbg PE=3 SV=1
Q65CX4 2.12e-216 13 662 1 657
Beta-galactosidase GalA OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=lacA PE=1 SV=2
O07012 2.91e-216 13 653 1 644
Beta-galactosidase GanA OS=Bacillus subtilis (strain 168) OX=224308 GN=ganA PE=1 SV=2
Q09HN2 7.72e-188 5 679 1 673
Beta-galactosidase BgaP OS=Planococcus sp. (strain L4) OX=377621 GN=bgaP PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000032 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000287_04592.