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CAZyme Information: MGYG000000302_01689

You are here: Home > Sequence: MGYG000000302_01689

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Collinsella sp900540905
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900540905
CAZyme ID MGYG000000302_01689
CAZy Family GH140
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
225 MGYG000000302_40|CGC1 24999.1 4.1229
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000302 2151766 MAG Sweden Europe
Gene Location Start: 98;  End: 775  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000302_01689.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH140 23 199 3.4e-34 0.41262135922330095

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13204 DUF4038 3.81e-19 28 123 226 318
Protein of unknown function (DUF4038). A family of putative cellulases.
pfam12904 Collagen_bind_2 0.007 177 222 45 92
Putative collagen-binding domain of a collagenase. This domain is likely to be the collagen-binding domain of a family of bacterial collagenase enzymes. It is the C-terminal part of the Structure 3kzs (information derived from TOPSAN).

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATP54502.1 8.76e-148 11 225 326 540
AQR97270.1 9.21e-70 13 222 322 532
QUC02871.1 1.71e-64 11 221 171 384
QTH41603.1 1.15e-22 12 222 352 556
QNK57358.1 1.98e-20 28 219 504 688

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000069 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000302_01689.