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CAZyme Information: MGYG000000303_00323

You are here: Home > Sequence: MGYG000000303_00323

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Varibaculum cambriense_A
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Actinomycetaceae; Varibaculum; Varibaculum cambriense_A
CAZyme ID MGYG000000303_00323
CAZy Family GH35
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
683 MGYG000000303_3|CGC1 76664.72 4.6251
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000303 2213433 MAG Sweden Europe
Gene Location Start: 5796;  End: 7847  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000303_00323.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH35 18 196 2.9e-46 0.5146579804560261

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01301 Glyco_hydro_35 4.19e-40 16 193 1 159
Glycosyl hydrolases family 35.
COG1874 GanA 8.17e-21 17 263 8 245
Beta-galactosidase GanA [Carbohydrate transport and metabolism].
pfam02449 Glyco_hydro_42 2.65e-18 37 320 8 262
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
PLN03059 PLN03059 3.23e-10 10 112 30 132
beta-galactosidase; Provisional
cd03143 A4_beta-galactosidase_middle_domain 5.33e-04 503 580 43 115
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUC14854.1 0.0 4 681 3 680
AFN45751.1 0.0 4 681 3 680
QUC10457.1 0.0 4 681 3 680
QCT37201.1 0.0 4 681 3 680
VEJ57903.1 0.0 4 681 3 680

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7VKX_A 9.39e-37 17 569 5 557
ChainA, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKX_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKY_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKY_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL0_A Chain A, Beta-galactosidase [Ignavibacterium album JCM 16511],7VL0_B Chain B, Beta-galactosidase [Ignavibacterium album JCM 16511],7VL1_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL1_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL2_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL2_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL3_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL3_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL4_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL4_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL5_A Chain A, Beta-galactosidase [Ignavibacterium album JCM 16511],7VL5_B Chain B, Beta-galactosidase [Ignavibacterium album JCM 16511],7VL6_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL6_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL7_A Chain A, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VL7_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511]
7X87_A 1.01e-36 17 569 10 562
ChainA, Beta-galactosidase [Ignavibacterium album],7X87_B Chain B, Beta-galactosidase [Ignavibacterium album]
7VKW_A 1.01e-36 17 569 10 562
ChainA, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKW_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511]
7VKZ_A 1.35e-36 17 569 10 562
ChainA, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511],7VKZ_B Chain B, beta-1,2-glucosyltransferase [Ignavibacterium album JCM 16511]
5GSL_A 2.30e-34 17 569 13 555
Glycosidehydrolase A [Pyrococcus horikoshii OT3],5GSL_B Glycoside hydrolase A [Pyrococcus horikoshii OT3]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O58247 1.26e-33 17 569 13 555
Exo-beta-D-glucosaminidase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=glmA PE=1 SV=1
Q76HN4 6.06e-27 17 569 11 551
Exo-beta-D-glucosaminidase OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) OX=69014 GN=glmA PE=1 SV=1
Q8IW92 2.70e-24 17 183 54 201
Beta-galactosidase-1-like protein 2 OS=Homo sapiens OX=9606 GN=GLB1L2 PE=1 SV=1
Q8NCI6 3.80e-24 13 187 76 231
Beta-galactosidase-1-like protein 3 OS=Homo sapiens OX=9606 GN=GLB1L3 PE=2 SV=3
Q3UPY5 2.49e-22 17 183 54 201
Beta-galactosidase-1-like protein 2 OS=Mus musculus OX=10090 GN=Glb1l2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000054 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000303_00323.