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CAZyme Information: MGYG000000305_00811
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | RF16 sp900542355 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Paludibacteraceae; RF16; RF16 sp900542355 | |||||||||||
| CAZyme ID | MGYG000000305_00811 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 81609; End: 84389 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 533 | 770 | 2.8e-45 | 0.7881944444444444 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 9.51e-16 | 533 | 734 | 115 | 350 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| PLN02432 | PLN02432 | 3.13e-14 | 538 | 727 | 48 | 222 | putative pectinesterase |
| PRK10531 | PRK10531 | 1.06e-13 | 581 | 720 | 198 | 348 | putative acyl-CoA thioester hydrolase. |
| pfam01095 | Pectinesterase | 1.81e-13 | 538 | 734 | 37 | 235 | Pectinesterase. |
| PLN02665 | PLN02665 | 3.30e-13 | 538 | 791 | 105 | 358 | pectinesterase family protein |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| VEH16322.1 | 4.11e-145 | 18 | 923 | 562 | 1467 |
| AGB28243.1 | 2.83e-143 | 15 | 884 | 557 | 1321 |
| QUT74167.1 | 2.19e-77 | 15 | 902 | 401 | 1398 |
| QCD38476.1 | 4.25e-51 | 532 | 878 | 1067 | 1414 |
| QCP72166.1 | 4.25e-51 | 532 | 878 | 1067 | 1414 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2NSP_A | 1.73e-17 | 533 | 816 | 37 | 339 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 1QJV_A | 1.47e-14 | 533 | 816 | 37 | 339 | ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi] |
| 2NTB_A | 1.47e-14 | 533 | 816 | 37 | 339 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
| 5C1C_A | 3.22e-12 | 533 | 814 | 38 | 294 | CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P0C1A9 | 1.01e-13 | 533 | 816 | 61 | 363 | Pectinesterase A OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemA PE=1 SV=1 |
| P0C1A8 | 1.35e-13 | 533 | 816 | 61 | 363 | Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1 |
| Q84R10 | 7.09e-13 | 533 | 734 | 239 | 442 | Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana OX=3702 GN=PME36 PE=2 SV=2 |
| Q7Y201 | 7.21e-11 | 533 | 827 | 332 | 612 | Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana OX=3702 GN=PME13 PE=2 SV=2 |
| Q2UBD9 | 9.78e-11 | 515 | 743 | 48 | 275 | Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.242577 | 0.756360 | 0.000343 | 0.000299 | 0.000211 | 0.000216 |