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CAZyme Information: MGYG000000305_00975

You are here: Home > Sequence: MGYG000000305_00975

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RF16 sp900542355
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Paludibacteraceae; RF16; RF16 sp900542355
CAZyme ID MGYG000000305_00975
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
793 86046.61 4.9056
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000305 2446714 MAG Sweden Europe
Gene Location Start: 55017;  End: 57398  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000305_00975.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 22 425 3.2e-84 0.9893333333333333

CDD Domains      help

MGYG000000305_00975 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCS85044.1 4.77e-137 20 446 1 434
ATB42709.1 5.03e-55 21 447 72 457
ADL51547.1 9.65e-52 55 446 82 452
BAV13166.1 9.65e-52 55 446 82 452
QRK08461.1 2.06e-51 31 448 100 474

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 1.13e-47 25 446 17 398
ChainA, Pectate lyase [Dickeya chrysanthemi]
5OLQ_A 8.92e-12 140 456 149 446
Rhamnogalacturonanlyase [Bacteroides thetaiotaomicron],5OLQ_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLQ_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_B Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLR_C Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron],5OLS_A Rhamnogalacturonan lyase [Bacteroides thetaiotaomicron]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A7 1.08e-46 25 446 42 423
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1
P0C1A6 8.57e-45 25 446 42 423
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P22751 5.02e-06 22 344 388 644
Pectate disaccharide-lyase OS=Dickeya chrysanthemi OX=556 GN=pelX PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001185 0.963380 0.034580 0.000292 0.000267 0.000270

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000305_00975.