logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000305_01460

You are here: Home > Sequence: MGYG000000305_01460

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RF16 sp900542355
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Paludibacteraceae; RF16; RF16 sp900542355
CAZyme ID MGYG000000305_01460
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
476 MGYG000000305_14|CGC1 51269.46 6.4897
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000305 2446714 MAG Sweden Europe
Gene Location Start: 10126;  End: 11556  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000305_01460.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 93 282 6.4e-80 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00656 Amb_all 2.25e-11 91 268 1 173
Amb_all domain.
COG3866 PelB 1.50e-08 10 282 4 273
Pectate lyase [Carbohydrate transport and metabolism].
pfam00544 Pec_lyase_C 1.71e-04 128 240 55 181
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AKD03746.1 4.60e-155 13 473 7 456
AXP82553.1 2.24e-153 39 475 121 555
AKD03745.1 2.88e-152 9 473 3 466
AHW58605.1 1.31e-150 32 472 29 473
ASB47754.1 5.45e-150 35 472 38 464

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 1.38e-52 40 476 21 418
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 5.25e-52 40 476 21 418
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q0CLG7 1.54e-48 40 476 21 418
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
Q4WL88 2.19e-48 40 476 22 419
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B0XMA2 3.05e-48 40 476 22 419
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000004 0.000098 0.999935 0.000001 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
13 35