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CAZyme Information: MGYG000000323_02480
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Enterococcus_D sp002850555 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus_D; Enterococcus_D sp002850555 | |||||||||||
| CAZyme ID | MGYG000000323_02480 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | Exo-poly-alpha-D-galacturonosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 87854; End: 89185 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 125 | 430 | 2.9e-53 | 0.7415384615384616 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 2.18e-53 | 104 | 417 | 86 | 392 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 1.25e-17 | 255 | 428 | 76 | 244 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03003 | PLN03003 | 1.66e-15 | 274 | 421 | 148 | 289 | Probable polygalacturonase At3g15720 |
| PLN03010 | PLN03010 | 4.57e-12 | 274 | 420 | 167 | 307 | polygalacturonase |
| PLN02793 | PLN02793 | 2.46e-09 | 273 | 428 | 186 | 334 | Probable polygalacturonase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ATF71280.1 | 0.0 | 1 | 443 | 1 | 443 |
| AYJ44988.1 | 0.0 | 1 | 443 | 1 | 443 |
| AUJ86498.1 | 0.0 | 1 | 443 | 1 | 443 |
| AMG48424.1 | 0.0 | 1 | 443 | 1 | 443 |
| QFR24450.1 | 4.28e-153 | 7 | 443 | 19 | 452 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3JUR_A | 9.78e-35 | 100 | 443 | 27 | 373 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 5OLP_A | 6.58e-30 | 112 | 413 | 56 | 350 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 2UVE_A | 1.11e-27 | 23 | 414 | 55 | 481 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 1K5C_A | 1.56e-07 | 312 | 403 | 151 | 230 | EndopolygalacturonaseI from Stereum purpureum at 0.96 A resolution [Chondrostereum purpureum],1KCC_A Endopolygalacturonase I from Stereum purpureum complexed with a galacturonate at 1.00 A resolution. [Chondrostereum purpureum],1KCD_A Endopolygalacturonase I from Stereum purpureum complexed with two galacturonate at 1.15 A resolution. [Chondrostereum purpureum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P15922 | 8.00e-27 | 19 | 408 | 46 | 468 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
| A7PZL3 | 7.76e-21 | 112 | 415 | 74 | 353 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P27644 | 9.90e-20 | 256 | 421 | 9 | 184 | Polygalacturonase OS=Rhizobium radiobacter OX=358 GN=pgl PE=2 SV=1 |
| P18192 | 1.04e-16 | 116 | 431 | 51 | 337 | Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1 |
| Q9LW07 | 3.43e-15 | 274 | 421 | 148 | 289 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000062 | 0.000002 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |