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CAZyme Information: MGYG000000326_02108
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Rothia terrae | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Micrococcaceae; Rothia; Rothia terrae | |||||||||||
| CAZyme ID | MGYG000000326_02108 | |||||||||||
| CAZy Family | AA3 | |||||||||||
| CAZyme Description | Choline oxidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 65; End: 1660 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| AA3 | 5 | 529 | 2.2e-147 | 0.9982394366197183 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK02106 | PRK02106 | 3.88e-133 | 5 | 526 | 4 | 531 | choline dehydrogenase; Validated |
| COG2303 | BetA | 5.70e-126 | 6 | 531 | 7 | 538 | Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]. |
| pfam05199 | GMC_oxred_C | 9.27e-45 | 383 | 522 | 2 | 143 | GMC oxidoreductase. This domain found associated with pfam00732. |
| pfam00732 | GMC_oxred_N | 4.50e-38 | 75 | 307 | 15 | 218 | GMC oxidoreductase. This family of proteins bind FAD as a cofactor. |
| PLN02785 | PLN02785 | 5.33e-25 | 7 | 519 | 56 | 569 | Protein HOTHEAD |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ATY64015.1 | 7.05e-128 | 7 | 526 | 14 | 530 |
| APA11104.1 | 4.03e-126 | 2 | 529 | 9 | 542 |
| QLI67559.1 | 4.33e-126 | 5 | 529 | 12 | 532 |
| QGI77692.1 | 3.75e-124 | 7 | 529 | 14 | 533 |
| CCT64188.1 | 3.75e-124 | 7 | 529 | 14 | 533 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2JBV_A | 8.05e-282 | 5 | 526 | 12 | 526 | Crystalstructure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],2JBV_B Crystal structure of choline oxidase reveals insights into the catalytic mechanism [Arthrobacter globiformis],4MJW_A Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis],4MJW_B Crystal Structure of Choline Oxidase in Complex with the Reaction Product Glycine Betaine [Arthrobacter globiformis] |
| 3NNE_A | 2.30e-281 | 5 | 526 | 12 | 526 | Crystalstructure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_B Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_C Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_D Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_E Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_F Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_G Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis],3NNE_H Crystal structure of choline oxidase S101A mutant [Arthrobacter globiformis] |
| 3LJP_A | 3.27e-281 | 5 | 526 | 12 | 526 | ChainA, Choline oxidase [Arthrobacter globiformis],3LJP_B Chain B, Choline oxidase [Arthrobacter globiformis] |
| 6YS2_AAA | 7.44e-65 | 5 | 527 | 6 | 561 | ChainAAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
| 6YS1_AAA | 7.44e-65 | 5 | 527 | 6 | 561 | ChainAAA, Fatty acid Photodecarboxylase [Chlorella variabilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q7X2H8 | 4.41e-281 | 5 | 526 | 12 | 526 | Choline oxidase OS=Arthrobacter globiformis OX=1665 GN=codA PE=1 SV=1 |
| A7MFA8 | 6.04e-82 | 5 | 524 | 1 | 529 | Oxygen-dependent choline dehydrogenase OS=Cronobacter sakazakii (strain ATCC BAA-894) OX=290339 GN=betA PE=3 SV=1 |
| B7N8L3 | 6.00e-81 | 5 | 526 | 1 | 531 | Oxygen-dependent choline dehydrogenase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) OX=585056 GN=betA PE=3 SV=1 |
| Q0T7N0 | 6.00e-81 | 5 | 526 | 1 | 531 | Oxygen-dependent choline dehydrogenase OS=Shigella flexneri serotype 5b (strain 8401) OX=373384 GN=betA PE=3 SV=1 |
| Q985M5 | 7.25e-81 | 6 | 524 | 3 | 524 | Oxygen-dependent choline dehydrogenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=betA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000071 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |