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CAZyme Information: MGYG000000338_01278
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Anaerobiospirillum sp900543125 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Succinivibrionaceae; Anaerobiospirillum; Anaerobiospirillum sp900543125 | |||||||||||
| CAZyme ID | MGYG000000338_01278 | |||||||||||
| CAZy Family | GT104 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 9114; End: 10271 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT104 | 1 | 337 | 7.3e-76 | 0.9050131926121372 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam10093 | DUF2331 | 3.40e-87 | 5 | 294 | 2 | 306 | Uncharacterized protein conserved in bacteria (DUF2331). Members of this family of hypothetical bacterial proteins have no known function. |
| TIGR03837 | EarP | 2.67e-84 | 5 | 294 | 2 | 305 | Elongation-Factor P (EF-P) rhamnosyltransferase EarP. This model describes a conserved protein that typically is encoded next to the gene efp for translation elongation factor P. |
| COG4394 | EarP | 1.16e-68 | 1 | 381 | 1 | 365 | Elongation-Factor P (EF-P) rhamnosyltransferase EarP [Translation, ribosomal structure and biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BBF86395.1 | 8.31e-57 | 2 | 326 | 30 | 353 |
| AVI87810.1 | 1.26e-54 | 3 | 292 | 4 | 307 |
| QBI62296.1 | 1.26e-54 | 3 | 292 | 4 | 307 |
| QDW01747.1 | 2.49e-54 | 2 | 292 | 3 | 307 |
| AAZ37214.1 | 2.49e-54 | 2 | 292 | 3 | 307 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6J7M_A | 5.97e-47 | 1 | 293 | 20 | 325 | Complexstructure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P [Pseudomonas aeruginosa PAO1],6J7M_C Complex structure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P [Pseudomonas aeruginosa PAO1] |
| 6J7L_A | 7.11e-47 | 1 | 293 | 20 | 325 | Crystalstructure of Pseudomonas aeruginosa Earp in complex with TDP [Pseudomonas aeruginosa PAO1] |
| 5NV8_A | 7.79e-46 | 5 | 292 | 19 | 319 | Structuralbasis for EarP-mediated arginine glycosylation of translation elongation factor EF-P [Pseudomonas putida KT2440] |
| 6J7J_A | 1.03e-45 | 3 | 293 | 22 | 325 | Crystalstructure of Pseudomonas aeruginosa Earp [Pseudomonas aeruginosa PAO1],6J7K_A Crystal structure of Pseudomonas aeruginosa Earp in complex with TDP-Rha [Pseudomonas aeruginosa PAO1] |
| 5WXI_A | 5.64e-35 | 6 | 291 | 10 | 302 | EarPbound with dTDP-rhamnose (soaked) [Neisseria meningitidis H44/76],5WXI_B EarP bound with dTDP-rhamnose (soaked) [Neisseria meningitidis H44/76],5WXJ_A Apo EarP [Neisseria meningitidis H44/76],5WXJ_B Apo EarP [Neisseria meningitidis H44/76],5WXK_A EarP bound with domain I of EF-P [Neisseria meningitidis H44/76] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q8EEP8 | 3.13e-47 | 5 | 308 | 11 | 336 | Protein-arginine rhamnosyltransferase OS=Shewanella oneidensis (strain MR-1) OX=211586 GN=earP PE=1 SV=1 |
| Q9HZZ1 | 2.14e-46 | 1 | 293 | 1 | 306 | Protein-arginine rhamnosyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=earP PE=1 SV=1 |
| Q88LS1 | 3.20e-45 | 5 | 292 | 6 | 306 | Protein-arginine rhamnosyltransferase OS=Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440) OX=160488 GN=earP PE=1 SV=1 |
| A0A0T7AQA7 | 8.34e-35 | 6 | 291 | 10 | 302 | Protein-arginine rhamnosyltransferase OS=Neisseria meningitidis OX=487 GN=earP PE=1 SV=1 |
| E6MVV9 | 3.09e-34 | 6 | 291 | 10 | 302 | Protein-arginine rhamnosyltransferase OS=Neisseria meningitidis serogroup B / serotype 15 (strain H44/76) OX=909420 GN=earP PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000078 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |