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CAZyme Information: MGYG000000339_00039

You are here: Home > Sequence: MGYG000000339_00039

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; UBA9475;
CAZyme ID MGYG000000339_00039
CAZy Family GH110
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2074 MGYG000000339_3|CGC1 225839.73 4.1435
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000339 1808008 MAG Sweden Europe
Gene Location Start: 5718;  End: 11942  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000339_00039.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH110 41 636 9.8e-140 0.958029197080292
CBM51 1582 1716 3.9e-36 0.9328358208955224

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08305 NPCBM 3.32e-38 1573 1717 4 136
NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.)
smart00776 NPCBM 3.87e-28 1568 1716 1 144
This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins.
COG5492 YjdB 7.81e-21 1725 1822 178 279
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam02368 Big_2 1.33e-15 1729 1805 1 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
smart00635 BID_2 1.04e-10 1727 1804 1 81
Bacterial Ig-like domain 2.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AYE35188.1 5.41e-249 24 1399 25 1395
QAS60591.1 2.06e-248 24 1399 25 1395
ATD55583.1 4.65e-169 42 714 3 618
ATD56740.1 4.65e-169 42 714 3 618
QBJ75880.1 4.97e-169 42 714 5 620

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 1.57e-46 19 606 12 542
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 6.86e-46 19 606 12 542
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]
7JS4_A 7.68e-27 1561 1811 600 833
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
7JRM_A 2.66e-24 1543 1716 55 223
ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124]
2VMH_A 2.95e-24 1587 1715 22 149
Thestructure of CBM51 from Clostridium perfringens GH95 [Clostridium perfringens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B1V8K7 1.17e-118 40 774 33 723
Alpha-1,3-galactosidase A OS=Streptacidiphilus griseoplanus OX=66896 GN=glaA PE=1 SV=1
Q826C5 4.08e-101 6 693 12 624
Alpha-1,3-galactosidase A OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=glaA PE=3 SV=1
Q8A2Z5 3.35e-60 59 629 29 532
Alpha-1,3-galactosidase A OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaA PE=3 SV=1
Q89ZX0 2.96e-59 37 632 23 556
Alpha-1,3-galactosidase B OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaB PE=3 SV=1
Q64MU6 3.59e-58 42 631 26 552
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000586 0.992756 0.005881 0.000348 0.000210 0.000167

TMHMM  Annotations      download full data without filtering help

start end
7 29
2045 2067