CAZyme Information: MGYG000000343_00195

Basic Information

• Species: Odoribacter sp900548135
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Marinifilaceae; Odoribacter; Odoribacter sp900548135
• CAZyme ID: MGYG000000343_00195
• CAZy Family: GH3
• CAZyme Description: Beta-hexosaminidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
952		106500.37	6.8798

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000343	3841231	MAG	Sweden	Europe

• Gene Location: Start: 245654; End: 248512 Strand: +

Full Sequence      

MNMKRYYLLPLLCLSMALGTVAQKKTVLKTYHPGKHVMYKKGWIDFNKNGRMDVYENPQA
KLEDRVEDLLSQMTLEEKTCQMVTLYGYGRVLKDDLPQPDWKNQIWKDGMGAIDEHLNGF
RGWGVAPDKNPNVWPASRHAWALNEVQRFFIEETRLGIPTDFTNEGIRGVESYMATNFPT
QLGLGHTWNRQLIHEVGRITGEEGRLLGYTNVYAPILDVGRDQRWGRYEEVYGECPWLVS
ELGIAMAKGVQHNHQVAATAKHFVAYSNNKGAREGFSRVDPQMSPREVEAIHLMPWKKVI
REAGLLGVMSSYNDYDGVPIQGSHYWLTDRLRVEMGFKGYIVSDSDAVEYLYQKHGVARN
MKEAVLKSVMAGLNVRCTFRSPDSYVLPLRELVEEGAIPMSVIDDRVRDILRVKFLVGLF
DHPYQTDLEKADRVVNCEKNQAVALQASRECLVLLKNENKTLPLNPDQIKTIAVCGPNAD
EKSYALTHYGPLAVEVSTVLSGVRERMAGKAEVLYAKGCDLVDPHWPESELVNFPMTTEE
EKGIAEAVANLYKADVGVVVLGGGVRTCGENKSRSGLDLPGRQQQLLEALVKTGKPLVLV
LINGRPLTINWAATHVPAILEAWYPGSQGGKAIAEVLFGDYNPGGKLTVTFPKSVGQIPF
NFPAKPASQVNGGSKPGMQGNQSRVNGALYPFGFGLSYTTFKYENLKIVPAEITPYQAVT
VSWDITNTGDREGDEVVQLYIRDVIGSVTTYEKNLRGFERVHLKPGEIRRVKFTVQPEDL
ALYDERHEWVVEPGEFRVMAGASSEDIRLKGSFQVVQAGQQRTVAQQKDYWAAYLSDSKA
SPTVKNVIDNDSETVWRGVAGEYITLSLKENAEPCQVDIIWANPKRSDVEFEIQLSSGGG
QFLPFYRGKYSGSGKQQMTYSFDKNAASDLRILITKGEASIARVQLKEFVLN

Enzyme Prediction     

No EC number prediction in MGYG000000343_00195.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH3	152	377	2.2e-62	0.9814814814814815

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK15098	PRK15098	4.76e-178	53	813	22	762	beta-glucosidase BglX.
PLN03080	PLN03080	4.12e-81	155	801	78	769	Probable beta-xylosidase; Provisional
COG1472	BglX	7.07e-73	139	490	41	377	Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam01915	Glyco_hydro_3_C	6.64e-62	452	698	1	216	Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
pfam00933	Glyco_hydro_3	3.89e-61	74	413	1	316	Glycosyl hydrolase family 3 N terminal domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QIK60364.1	0.0	7	946	3	936
QIK54931.1	0.0	7	946	3	936
QIU94792.1	0.0	3	948	1	943
QUT50560.1	0.0	12	948	13	952
QQT77476.1	0.0	11	948	4	943

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5XXL_A	3.52e-136	52	808	1	745	Crystalstructure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXL_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482],5XXM_A Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482],5XXM_B Crystal structure of GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with gluconolactone [Bacteroides thetaiotaomicron VPI-5482]
5XXN_A	1.91e-135	52	808	1	745	CrystalStructure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXN_B Crystal Structure of mutant (D286N) beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorose [Bacteroides thetaiotaomicron VPI-5482],5XXO_A Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482],5XXO_B Crystal structure of mutant (D286N) GH3 beta-glucosidase from Bacteroides thetaiotaomicron in complex with sophorotriose [Bacteroides thetaiotaomicron VPI-5482]
5YOT_A	6.95e-127	55	815	7	756	Isoprimeverose-producingenzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YOT_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_A Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40],5YQS_B Isoprimeverose-producing enzyme from Aspergillus oryzae in complex with isoprimeverose [Aspergillus oryzae RIB40]
7EAP_A	5.24e-126	55	815	7	756	ChainA, Fn3_like domain-containing protein [Aspergillus oryzae RIB40]
5TF0_A	2.86e-124	143	808	68	744	CrystalStructure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393],5TF0_B Crystal Structure of Glycosil Hydrolase Family 3 N-Terminal Domain Protein from Bacteroides intestinalis [Bacteroides intestinalis DSM 17393]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KMH0	5.10e-140	155	810	62	716	Beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22130 PE=1 SV=1
P33363	2.57e-127	53	816	22	765	Periplasmic beta-glucosidase OS=Escherichia coli (strain K12) OX=83333 GN=bglX PE=3 SV=2
Q56078	3.02e-124	58	816	31	765	Periplasmic beta-glucosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=bglX PE=3 SV=2
T2KMH9	4.06e-120	55	815	29	754	Putative beta-xylosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22230 PE=2 SV=1
A7LXU3	9.50e-91	62	807	35	768	Beta-glucosidase BoGH3B OS=Bacteroides ovatus (strain ATCC 8483 / DSM 1896 / JCM 5824 / BCRC 10623 / CCUG 4943 / NCTC 11153) OX=411476 GN=BACOVA_02659 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000464	0.998701	0.000299	0.000176	0.000167	0.000149

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000343_00195.