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CAZyme Information: MGYG000000343_01830

You are here: Home > Sequence: MGYG000000343_01830

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Odoribacter sp900548135
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Marinifilaceae; Odoribacter; Odoribacter sp900548135
CAZyme ID MGYG000000343_01830
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
998 113609.38 8.1933
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000343 3841231 MAG Sweden Europe
Gene Location Start: 4614;  End: 7610  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000343_01830.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 45 864 1.9e-116 0.9534574468085106

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 7.42e-71 50 859 42 872
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 1.06e-61 52 447 15 429
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK09525 lacZ 2.43e-52 51 473 54 508
beta-galactosidase.
PRK10150 PRK10150 3.09e-45 52 449 15 447
beta-D-glucuronidase; Provisional
pfam02836 Glyco_hydro_2_C 2.26e-32 293 606 1 300
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCQ52405.1 0.0 7 998 7 1001
QRM68574.1 0.0 7 998 7 1001
QCQ30210.1 0.0 7 998 7 1001
QCQ34661.1 0.0 7 998 7 1001
QLK80725.1 0.0 7 998 7 1001

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6S6Z_A 2.26e-64 52 938 41 906
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6SD0_A 2.27e-64 52 938 42 907
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
3BGA_A 8.39e-52 52 646 51 654
Crystalstructure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482],3BGA_B Crystal structure of beta-galactosidase from Bacteroides thetaiotaomicron VPI-5482 [Bacteroides thetaiotaomicron VPI-5482]
3DEC_A 7.90e-51 52 637 47 641
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3I3B_A 2.71e-40 109 548 143 574
ChainA, Beta-galactosidase [Escherichia coli K-12],3I3B_B Chain B, Beta-galactosidase [Escherichia coli K-12],3I3B_C Chain C, Beta-galactosidase [Escherichia coli K-12],3I3B_D Chain D, Beta-galactosidase [Escherichia coli K-12],3I3D_A Chain A, Beta-galactosidase [Escherichia coli K-12],3I3D_B Chain B, Beta-galactosidase [Escherichia coli K-12],3I3D_C Chain C, Beta-galactosidase [Escherichia coli K-12],3I3D_D Chain D, Beta-galactosidase [Escherichia coli K-12],3I3E_A Chain A, Beta-galactosidase [Escherichia coli K-12],3I3E_B Chain B, Beta-galactosidase [Escherichia coli K-12],3I3E_C Chain C, Beta-galactosidase [Escherichia coli K-12],3I3E_D Chain D, Beta-galactosidase [Escherichia coli K-12]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 1.24e-63 52 938 42 907
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
Q8D4H3 1.01e-46 43 547 41 570
Beta-galactosidase OS=Vibrio vulnificus (strain CMCP6) OX=216895 GN=lacZ PE=3 SV=2
B4S2K9 4.25e-46 51 740 49 777
Beta-galactosidase OS=Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype) OX=1774373 GN=lacZ PE=3 SV=1
Q7MG04 7.26e-46 43 547 41 569
Beta-galactosidase OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=lacZ PE=3 SV=1
A0KQH4 6.78e-45 51 618 48 640
Beta-galactosidase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.006619 0.991476 0.001071 0.000358 0.000230 0.000205

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000343_01830.