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CAZyme Information: MGYG000000345_00851

You are here: Home > Sequence: MGYG000000345_00851

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1829 sp002338895
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA1829; UBA1829 sp002338895
CAZyme ID MGYG000000345_00851
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
482 55074.57 5.1255
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000345 3773289 MAG Sweden Europe
Gene Location Start: 326407;  End: 327855  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000345_00851.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 154 434 2.6e-32 0.6338461538461538

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.77e-13 162 304 198 337
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.47e-08 210 372 88 242
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 3.16e-06 215 282 165 232
polygalacturonase
PLN02793 PLN02793 3.04e-05 215 282 185 252
Probable polygalacturonase
PLN03003 PLN03003 4.12e-04 215 282 146 213
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AHF88976.1 7.06e-119 3 463 67 548
QQR16514.1 3.13e-71 5 439 31 416
ANU58578.2 4.15e-71 5 439 42 427
QNN23865.1 3.29e-37 3 341 38 345
QQA09746.1 3.76e-35 64 367 113 419

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000072 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000345_00851.