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CAZyme Information: MGYG000000345_01019

You are here: Home > Sequence: MGYG000000345_01019

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1829 sp002338895
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA1829; UBA1829 sp002338895
CAZyme ID MGYG000000345_01019
CAZy Family GH50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
685 78384.91 9.8212
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000345 3773289 MAG Sweden Europe
Gene Location Start: 200893;  End: 202950  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000345_01019.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH50 320 672 2.9e-90 0.557427258805513
GH50 68 315 1e-41 0.3675344563552833

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02449 Glyco_hydro_42 2.76e-04 398 561 106 262
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM45357.1 0.0 5 685 5 683
AHF89585.1 6.93e-266 6 685 4 690
AHF89577.1 1.06e-264 6 685 14 698
AXP07841.1 1.95e-230 57 685 77 701
ASV75458.1 1.26e-132 34 675 33 681

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4BQ2_A 4.78e-80 207 679 204 750
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ2_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_C Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ3_D Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
5Z6P_A 1.22e-79 181 676 203 765
Thecrystal structure of an agarase, AgWH50C [Agarivorans gilvus],5Z6P_B The crystal structure of an agarase, AgWH50C [Agarivorans gilvus]
4BQ4_A 1.28e-79 207 679 204 750
Structuralanalysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ4_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_A Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40],4BQ5_B Structural analysis of an exo-beta-agarase [Saccharophagus degradans 2-40]
6XJ9_A 6.28e-78 207 675 223 762
Structureof PfGH50B [Pseudoalteromonas fuliginea],6XJ9_B Structure of PfGH50B [Pseudoalteromonas fuliginea]
5T3B_A 3.65e-20 190 672 27 473
ChainA, Glycoside Hydrolase [Phocaeicola plebeius],5T3B_B Chain B, Glycoside Hydrolase [Phocaeicola plebeius]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P48840 2.22e-81 70 675 297 952
Beta-agarase B OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaB PE=3 SV=1
P48839 2.70e-57 203 672 395 913
Beta-agarase A OS=Vibrio sp. (strain JT0107) OX=47913 GN=agaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000537 0.998690 0.000258 0.000183 0.000166 0.000149

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000345_01019.