CAZyme Information: MGYG000000345_01268

Basic Information

• Species: UBA1829 sp002338895
• Lineage: Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA1829; UBA1829 sp002338895
• CAZyme ID: MGYG000000345_01268
• CAZy Family: CBM9
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
846		94722.21	9.9711

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000345	3773289	MAG	Sweden	Europe

• Gene Location: Start: 205988; End: 208528 Strand: -

Full Sequence      

MTATDAFGRLVLERKGKVGETALTLRFPGPDYYKLSAELLRNGRSIARRETSLLITTPLP
RDYYATPNPAFGVWGGLTPRLRELGGAKWDRQLFFTVFQKKDAKPTPPSPEQIAKREPVK
IIRCMNILNPFKRMVPVPAADRAKLSAALGVEIASRRGLVDVWETQNEPMVGENFHGTMN
DVMDIIKLESEAVRRHDPGRTIAGICINPMNANQYAQYIGYYKQHGIDRYIDAIMLHPYI
PGAQNPDSSGYAETLTRLQKELRTIAGHPVPMYISEIGYSTKPGGEITELQQAAYLARVV
ILNRTIPELKACVWHIGLWNDATSRRELDFGLLRRHPKKSAVREPKPAFAAWATVSRMTY
NAELVRELNIGRKLRVWLFNRNGTPMLIAYSLLPEEVDFRLVMNTPEATVTEVCGKTEKR
KLEDGVLKLRLTEAPVYILGGKLEDFTSDRFNAVFSPKNLSVVSGGEQTVSIRLPDSLAS
SAMRLSMQTDLPLTVNRVTGSGKEWKATFGVADRTAPGEHEIFFRLEENGSSRYIWQKTL
TVKPPAELTKLSALPDGNDPRIRFHVTENRKNGNGSSYVLEIQENDQVVSLSRVTAGRTA
EATLLNTRTGKKNRYTAHFTASDGFRWTQNLPQDLVPIRIPFRQNALAADPSLWPRSGWY
AIENGTPSAHGLKGQFDRPAGTIRLAYDKTNLYFAVDVRDRDFLPSSSASSLWNGDSLQI
GIRVPQKDMIRPNNDGIQETAYAEFGVSASSARPNSWVWASMNLNNMPLHKPVPGIRSEN
AFRNGEIVYRFAIPWKTLNIKPSKGMELGISILVNDRDPAGRHWVEWFSGIAYGKDPSLY
GSAVLQ

Enzyme Prediction     

No EC number prediction in MGYG000000345_01268.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM9	652	845	3.4e-17	0.9615384615384616

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd09621	CBM9_like_5	7.27e-30	673	845	23	188	DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily are often located at the C-terminus of longer proteins and may co-occur with various other functional domains such as glycosyl hydrolases. The CBM9 module in these architectures may be involved in binding to carbohydrates.
cd09619	CBM9_like_4	1.01e-13	648	841	3	187	DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily are often located at the C-terminus of longer proteins and may co-occur with various other domains.
pfam06452	CBM9_1	2.38e-12	652	846	7	182	Carbohydrate family 9 binding domain-like. CBM9_1 is a C-terminal domain on bacterial xylanase proteins, and it is tandemly repeated in a number of family-members. The CBM9 module binds to amorphous and crystalline cellulose and a range of soluble di- and monosaccharides as well as to cello- and xylo- oligomers of different degrees of polymerization. Comparison of the glucose and cellobiose complexes during crystallisation reveals surprising differences in binding of these two substrates by CBM9-2. Cellobiose was found to bind in a distinct orientation from glucose, while still maintaining optimal stacking and electrostatic interactions with the reducing end sugar.
cd00241	DOMON_like	5.81e-11	681	827	20	158	Domon-like ligand-binding domains. DOMON-like domains can be found in all three kindgoms of life and are a diverse group of ligand binding domains that have been shown to interact with sugars and hemes. DOMON domains were initially thought to confer protein-protein interactions. They were subsequently found as a heme-binding motif in cellobiose dehydrogenase, an extracellular fungal oxidoreductase that degrades both lignin and cellulose, and in ethylbenzene dehydrogenase, an enzyme that aids in the anaerobic degradation of hydrocarbons. The domain interacts with sugars in the type 9 carbohydrate binding modules (CBM9), which are present in a variety of glycosyl hydrolases, and it can also be found at the N-terminus of sensor histidine kinases.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AVM46236.1	0.0	1	846	414	1257
AVM43814.1	1.87e-266	1	845	222	1054
QTH43804.1	1.32e-43	5	842	260	1110
AZS14129.1	3.08e-33	19	843	431	1261
SDS46467.1	3.29e-31	2	840	232	1079

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000057	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000345_01268.