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CAZyme Information: MGYG000000345_03004

You are here: Home > Sequence: MGYG000000345_03004

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1829 sp002338895
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA1829; UBA1829 sp002338895
CAZyme ID MGYG000000345_03004
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
625 70955.08 9.6696
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000345 3773289 MAG Sweden Europe
Gene Location Start: 2096;  End: 3973  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000345_03004.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 76 228 3.3e-17 0.4431554524361949

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 7.88e-07 70 166 3 111
Glycosyl hydrolase family 10.
COG3693 XynA 2.44e-06 66 173 65 187
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam02449 Glyco_hydro_42 1.38e-04 42 110 5 75
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
pfam11790 Glyco_hydro_cc 0.001 142 242 71 168
Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781.
pfam00331 Glyco_hydro_10 0.008 70 144 46 128
Glycosyl hydrolase family 10.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44885.1 1.20e-162 22 623 17 617
QDU57372.1 1.50e-97 1 623 1 631
AVM44901.1 5.96e-66 33 589 25 599
ADE82856.1 4.80e-42 31 622 34 406
AHF90941.1 1.20e-38 16 551 214 776

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4ZN2_A 2.59e-14 36 250 22 258
Glycosylhydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_B Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_C Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],4ZN2_D Glycosyl hydrolase from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]
5BX9_A 2.59e-14 36 250 22 258
Structureof PslG from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1],5BXA_A Structure of PslG from Pseudomonas aeruginosa in complex with mannose [Pseudomonas aeruginosa PAO1]
5JVK_A 9.73e-13 36 260 107 358
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000268 0.999097 0.000156 0.000173 0.000143 0.000134

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000345_03004.