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CAZyme Information: MGYG000000346_00162

You are here: Home > Sequence: MGYG000000346_00162

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; ;
CAZyme ID MGYG000000346_00162
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2320 250521.63 4.0326
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000346 2294646 MAG Sweden Europe
Gene Location Start: 2883;  End: 9845  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000346_00162.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 1318 1605 2.6e-67 0.9583333333333334
PL1 1751 1988 5.8e-40 0.8168316831683168

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5263 COG5263 8.78e-43 2154 2318 155 312
Glucan-binding domain (YG repeat) [Carbohydrate transport and metabolism].
NF033838 PspC_subgroup_1 1.11e-39 2139 2318 476 682
pneumococcal surface protein PspC, choline-binding form. The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
NF033930 pneumo_PspA 7.10e-39 2139 2316 432 599
pneumococcal surface protein A. The pneumococcal surface protein proteins, found in Streptococcus pneumoniae, are repetitive, with patterns of localized high sequence identity across pairs of proteins given different specific names that recombination may be presumed. This protein, PspA, has an N-terminal region that lacks a cross-wall-targeting YSIRK type extended signal peptide, in contrast to the closely related choline-binding protein CbpA which has a similar C-terminus but a YSIRK-containing region at the N-terminus.
PLN02773 PLN02773 4.03e-37 1321 1606 17 296
pectinesterase
COG4677 PemB 1.00e-34 1308 1599 87 395
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADD62022.1 0.0 84 2086 25 2030
QEH70392.1 0.0 819 2086 497 1754
ACZ98653.1 0.0 808 2085 74 1348
ACR72234.1 2.91e-117 830 1612 279 1071
AWV33413.1 1.81e-83 1653 2086 108 550

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GT5_A 3.80e-77 1656 2085 7 446
Structuralbasis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602],5GT5_B Structural basis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602]
2NSP_A 1.17e-33 1297 1610 2 339
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
1QJV_A 2.52e-29 1297 1610 2 339
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]
2NTB_A 8.43e-29 1297 1610 2 339
Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937]
3UW0_A 1.03e-24 1321 1593 44 345
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D3JTC2 3.57e-72 1656 1988 36 370
Pectate lyase B OS=Paenibacillus amylolyticus OX=1451 GN=pelB PE=1 SV=1
P0C1A8 3.00e-28 1297 1610 26 363
Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1
P0C1A9 7.39e-28 1297 1610 26 363
Pectinesterase A OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemA PE=1 SV=1
Q9LVQ0 1.44e-23 1316 1606 12 296
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q9FM79 2.56e-22 1316 1579 87 339
Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.060209 0.934432 0.004431 0.000387 0.000264 0.000262

TMHMM  Annotations      download full data without filtering help

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