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CAZyme Information: MGYG000000346_00273

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Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; ;
CAZyme ID MGYG000000346_00273
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
786 MGYG000000346_31|CGC1 87997.27 4.8941
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000346 2294646 MAG Sweden Europe
Gene Location Start: 2594;  End: 4954  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000346_00273.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 34 284 1.6e-32 0.6030769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.45e-15 22 311 146 434
Polygalacturonase [Carbohydrate transport and metabolism].
pfam05345 He_PIG 0.007 732 773 40 81
Putative Ig domain. This alignment represents the conserved core region of ~90 residue repeat found in several haemagglutinins and other cell surface proteins. Sequence similarities to (pfam02494) and (pfam00801) suggest an Ig-like fold (personal obs:C. Yeats). So this family may be similar in function to the (pfam02639) and (pfam02638) domains. This domain is also found in the WisP family of proteins of Tropheryma whipplei.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCJ93914.1 0.0 1 783 86 880
CBL02329.1 5.95e-301 1 786 128 900
AXB28928.1 1.10e-300 1 786 146 918
AHG93184.1 1.24e-83 1 592 89 513
AWI10510.1 6.17e-80 22 617 86 516

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

1.000031 0.000022 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000346_00273.