CAZyme Information: MGYG000000350_00250

Basic Information

• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272
• CAZyme ID: MGYG000000350_00250
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
687		77124.2	4.7534

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000350	1589625	MAG	Sweden	Europe

• Gene Location: Start: 2720; End: 4783 Strand: +

Full Sequence      

MNSSPLSSSEWIAPSVPSPSPVIIREFTANSADAANLTVTGLGYFEARLNGKKLGDDFFS
PNATDYETRLFTEITYPCRDRFTHRIYYKTFDLSGLLSDGSNRLEIQLGGGWFVQDERIA
EGKMSFGDRVKCIYSLKFQDCEINSDGSEMWHPSEIIYSNLFIGEIIDPIAESTTHQVIT
LPSPESELCPEIGAPDRIIRTVKPKKIGEFLYDAGENVSGFVRIKTKPGYAGKITLRFAE
EIKDGEIYPVSAGGRHKCSSGKPQIMTDTFVCDGTERIFEPKFVWHCFRYFDVAGEFADA
EVIVIHSDVPVTSGFESDSEGCNFLYDAYIRTELDNMHGSFPSDCPHRERLGYTGDGQIT
APAAMLLFDSREFYLKWIQDILDCQDPDTGHIQHTAPFMGGGGGPGGWGSAVIIVPYHFW
KIFGDRNILLKTYPAMKKWIGYLISHSENSLVVREEEGGWCLGDWCTFDKCKLPEPLVNS
YYLVITLRMMREIANEIGEAFEYGKLEEDTLEAIKNRYFTGDYDISQGRLVYGAALGLVS
ADECAEYYEKLGYFDTGFLATDILCELLFRSGHADVFGKLIENDSPGSYLYMKRKNSTTI
WEDWHGYSSHCHPMFGAPVRQLFEGILGIKPLSPGFENYSVNPQLPDSMNYAKGFVTTPR
GRLTVEVKRVGDKIEVKSELTEIPPKA

Enzyme Prediction     

No EC number prediction in MGYG000000350_00250.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	206	677	9.3e-112	0.9642857142857143

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	1.55e-60	312	626	3	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	8.90e-20	35	200	6	172	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592	Bac_rhamnosid	2.88e-11	208	295	6	86	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	1.87e-05	628	685	1	55	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AUS97255.1	7.24e-175	21	669	17	687
BCJ98018.1	1.42e-128	20	680	136	848
QOY86540.1	3.56e-127	19	669	150	821
QUT50058.1	5.30e-106	19	680	160	848
AWY99317.1	1.05e-97	10	666	130	813

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6I60_A	3.62e-62	35	665	192	873	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
3W5M_A	1.09e-60	35	644	319	948	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6GSZ_A	8.17e-48	25	661	136	810	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q82PP4	5.59e-60	35	644	319	948	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
P9WF03	1.28e-55	35	676	186	864	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KPL4	6.70e-53	33	661	198	877	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
T2KNB2	3.15e-47	21	679	174	860	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000018	0.000032	0.000001	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000350_00250.