CAZyme Information: MGYG000000355_00561

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Tannerellaceae; Parabacteroides
• CAZyme ID: MGYG000000355_00561
• CAZy Family: GH163
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
735	MGYG000000355_9|CGC2	83822.03	5.6493

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000355	2806154	MAG	Sweden	Europe

• Gene Location: Start: 51372; End: 53579 Strand: +

Full Sequence      

MKHQLQKWSAVALSAFLCLSGAHSQMTFVKEGKAVSRIVIADKDSVNRRAADLLQDFVQR
ISGSALPIVENAKVKKGDIVIGQGSTEGLTEDGFRLATREGVLWISSGGDKGAIYGVVTL
LDDYLGVEYYTAHTYTLEKKSTLEIPDLNRAENPSFRYRQTQSYAIQEDPIYKMWFRLEE
PREVFADNLWVHTFDKILPSSEFGEAHPEYYSYINGERRPGAASQWCLTNPEVFEIVAHR
VDSIFQANPDKRMISISQNDGNFTNCTCPACQALDEQEGGTPSGSLIHFLNKLAARFPDK
EFSTLAYLFTMHPPKHVKPLPNVNIMLCDIDCRREVPLTDNVSGQDFMRAMEGWSKISDN
IFVWDYGINFDCYLSPFPNFPILQKNMQLFKDHHVTMHFSQIAGSKCGTFTEMRAYIVSK
LMWNTQLDVDSLMKQFMQGYYGAAAPYLYQYEKLLEGALLGSGQDLWIFDSPVSHKRGML
NAHCLKRYNELFDQAEKAVADDPDLLDRVRIERLTLQYSELETARAEGGHDVNEIKEKLA
LFRERAAYYKLPTLNERMNSPLDYCDLYEKRFLPKAEKNYAKNAKITWIEAPSDKYLPEA
AKTLTDELYGGTSFVESWIGWEGKNGSFVLDLGKEVDIRVIESDFLHQLGQWVFLPKKVS
YSVSSDNQSYQPFGTTDIAEDQSVEVKFFQARSEKQQPVKGRYVKVEIEGVNTCPSWHCG
VGHKAWFFMDEIRVN

Enzyme Prediction     

No EC number prediction in MGYG000000355_00561.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH163	198	451	9.4e-105	0.9880478087649402

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16126	DUF4838	3.15e-134	190	451	1	262	Domain of unknown function (DUF4838). This family consists of several uncharacterized proteins found in various Bacteroides and Chloroflexus species. The function of this family is unknown.
pfam02838	Glyco_hydro_20b	5.53e-08	36	121	24	105	Glycosyl hydrolase family 20, domain 2. This domain has a zincin-like fold.
pfam00754	F5_F8_type_C	5.58e-05	617	717	25	121	F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.
cd21375	cwf21_SRRM2	1.32e-04	502	543	16	57	cwf21 domain found in serine/arginine repetitive matrix protein 2. Serine/arginine repetitive matrix protein 2 (SRRM2) is also called 300 kDa nuclear matrix antigen, serine/arginine-rich splicing factor-related nuclear matrix protein of 300 kDa, SR-related nuclear matrix protein of 300 kDa, Ser/Arg-related nuclear matrix protein of 300 kDa, splicing coactivator subunit SRm300, or Tax-responsive enhancer element-binding protein 803 (TaxREB803). It is required for pre-mRNA splicing as component of the spliceosome. It contains a cwf21 domain at the N-terminus. The cwf21 domain is involved in mRNA splicing; it binds directly to the spliceosomal protein Prp8.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ANU63563.1	0.0	18	735	15	732
ASB38357.1	0.0	18	735	15	732
QQR09102.1	0.0	18	735	15	732
QCY55671.1	0.0	4	734	3	731
QUT53540.1	0.0	4	734	3	731

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001067	0.821934	0.176192	0.000304	0.000258	0.000239

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000355_00561.