logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000356_01363

You are here: Home > Sequence: MGYG000000356_01363

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; VUNI01;
CAZyme ID MGYG000000356_01363
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
419 MGYG000000356_10|CGC2 46971.82 4.4253
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000356 2991584 MAG Sweden Europe
Gene Location Start: 68308;  End: 69567  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000356_01363.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 3.22e-16 344 405 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 5.17e-10 335 407 117 185
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 9.03e-09 341 405 41 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
pfam13620 CarboxypepD_reg 2.06e-05 17 113 2 81
Carboxypeptidase regulatory-like domain.
COG2989 YcbB 0.007 319 419 212 308
Murein L,D-transpeptidase YcbB/YkuD [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VCV21206.1 4.73e-217 1 419 1 419
QJU14725.1 3.07e-211 7 419 9 421
QQQ92685.1 3.07e-211 7 419 9 421
ASU27931.1 3.07e-211 7 419 9 421
AWY98201.1 1.18e-208 8 419 10 421

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000356_01363.