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CAZyme Information: MGYG000000359_00985

You are here: Home > Sequence: MGYG000000359_00985

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UBA7182;
CAZyme ID MGYG000000359_00985
CAZy Family PL12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
559 MGYG000000359_8|CGC4 64352.77 5.9841
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000359 2647452 MAG Sweden Europe
Gene Location Start: 69156;  End: 70835  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000359_00985.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL12 334 416 6.3e-24 0.5869565217391305

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 1.81e-38 329 478 7 167
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
COG5360 COG5360 1.44e-15 228 495 220 512
Uncharacterized conserved protein, heparinase superfamily [Function unknown].
pfam16889 Hepar_II_III_N 2.54e-12 86 333 84 338
Heparinase II/III N-terminus. This is the N-terminal domain of heparinase II/III proteins. It is a toroid-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUO20838.1 0.0 1 559 1 559
QNU66806.1 9.17e-112 4 427 4 439
CCG46765.1 2.64e-101 5 503 6 514
ASF40738.1 2.64e-101 5 503 6 514
BAK43911.1 3.68e-101 11 422 13 434

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MMH_A 4.85e-13 86 409 99 453
Crystalstructure of heparan sulfate lyase HepC from Pedobacter heparinus [Pedobacter heparinus]
4MMI_A 4.85e-13 86 409 99 453
Crystalstructure of heparan sulfate lyase HepC mutant from Pedobacter heparinus [Pedobacter heparinus]
4FNV_A 3.07e-10 51 417 103 525
CrystalStructure of Heparinase III [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q59289 2.71e-12 86 409 123 477
Heparin-sulfate lyase OS=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / CIP 104194 / JCM 7457 / NBRC 12017 / NCIMB 9290 / NRRL B-14731 / HIM 762-3) OX=485917 GN=hepC PE=1 SV=1
Q89YR9 1.68e-09 51 417 103 525
Heparin-sulfate lyase OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=hepC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000043 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000359_00985.