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CAZyme Information: MGYG000000360_01934

You are here: Home > Sequence: MGYG000000360_01934

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1829 sp900548385
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA1829; UBA1829 sp900548385
CAZyme ID MGYG000000360_01934
CAZy Family GH10
CAZyme Description Anti-sigma-I factor RsgI6
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
443 MGYG000000360_4|CGC3 52166.1 5.6992
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000360 4492877 MAG Sweden Europe
Gene Location Start: 200617;  End: 201948  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000360_01934.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 53 383 3.1e-44 0.9735973597359736

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 6.12e-39 97 380 3 261
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 5.28e-24 75 347 22 278
Glycosyl hydrolase family 10.
COG3693 XynA 2.99e-23 97 384 69 339
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44415.1 1.19e-109 20 441 24 439
QMW04637.1 1.14e-102 17 432 31 436
AHF90707.1 1.08e-101 6 443 15 456
QHV94149.1 7.84e-100 17 432 31 435
QIP12711.1 1.24e-98 17 432 31 435

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7D88_A 6.38e-27 25 431 52 412
ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)]
7D89_A 5.54e-26 25 431 52 412
ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)]
4L4O_A 1.64e-10 96 346 43 301
Thecrystal structure of CbXyn10B in native form [Caldicellulosiruptor bescii DSM 6725]
4PMY_A 5.36e-10 96 358 26 287
Crystalstructure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylose [Xanthomonas citri pv. citri str. 306],4PMY_B Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylose [Xanthomonas citri pv. citri str. 306],4PMZ_A Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylobiose [Xanthomonas citri pv. citri str. 306],4PMZ_B Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylobiose [Xanthomonas citri pv. citri str. 306]
4PN2_A 5.44e-10 96 358 27 288
Crystalstructure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylotriose [Xanthomonas citri pv. citri str. 306],4PN2_B Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylotriose [Xanthomonas citri pv. citri str. 306]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A3DH97 1.06e-16 19 422 382 737
Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1
O69230 1.14e-08 123 346 431 674
Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis OX=198119 GN=xynC PE=1 SV=1
P23360 2.64e-07 97 265 77 236
Endo-1,4-beta-xylanase OS=Thermoascus aurantiacus OX=5087 GN=XYNA PE=1 SV=4

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000056 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000360_01934.