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CAZyme Information: MGYG000000366_01466

You are here: Home > Sequence: MGYG000000366_01466

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS882 sp900757905
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-382; UMGS882; UMGS882 sp900757905
CAZyme ID MGYG000000366_01466
CAZy Family SLH
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1415 MGYG000000366_15|CGC1 149968.47 4.8352
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000366 2815847 MAG Sweden Europe
Gene Location Start: 50158;  End: 54405  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000366_01466.

CAZyme Signature Domains help

Family Start End Evalue family coverage
SLH 94 135 2.5e-16 0.9761904761904762

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
NF033190 inl_like_NEAT_1 3.91e-12 41 206 588 753
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395 SLH 2.63e-10 94 135 1 42
S-layer homology domain.
pfam00395 SLH 1.75e-08 37 76 2 42
S-layer homology domain.
pfam13205 Big_5 2.58e-08 441 548 8 106
Bacterial Ig-like domain.
NF033190 inl_like_NEAT_1 4.21e-06 35 145 642 754
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNL44990.1 8.91e-160 8 1203 2 969
VDN48011.1 9.45e-99 27 680 22 661
QOX65054.1 1.51e-80 24 657 43 662
VDN48012.1 2.66e-71 38 670 34 653
BAU26536.1 2.48e-50 19 420 10 432

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P38535 6.52e-20 37 209 909 1085
Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
P38537 8.99e-20 1 210 1 209
Surface-layer 125 kDa protein OS=Lysinibacillus sphaericus OX=1421 PE=3 SV=1
C6CRV0 3.88e-19 43 204 1291 1458
Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
P38536 5.46e-17 37 205 1683 1855
Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
Q06852 1.88e-13 51 201 2098 2260
Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000336 0.998696 0.000294 0.000229 0.000213 0.000174

TMHMM  Annotations      download full data without filtering help

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