CAZyme Information: MGYG000000366_02096

Basic Information

• Species: UMGS882 sp900757905
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-382; UMGS882; UMGS882 sp900757905
• CAZyme ID: MGYG000000366_02096
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
2054	MGYG000000366_31|CGC1	225210.02	4.4511

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000366	2815847	MAG	Sweden	Europe

• Gene Location: Start: 11763; End: 17927 Strand: +

Full Sequence      

MKKFLSVLLAASLLTASMPTLGLHAAAADTTPADTVKIVGMQTDHMTDPIGIDSETPVFS
WKLEAPAVRGQKQTAYRVTVADSEENLASGEKIWDSDFVESDETLDIPYAGEALEPSTRY
YWQVEIKDKDGKASLSEPAFFETGLMDSGWSDAKWISRSEPKSDGYFALTSFSLDFDYTL
VSSAASILFGGKSNSDFYMWQISAFSWHNDFRLRPHVCRSGGFSELSSATLESDKTNAYK
THHMTIECKDGVVKTYHDGTLKDTRTLSGLELGYIGFRCASPESFTADNIVVKDGDGKVL
LNADFDDENLNGFAGIPIVDGVLSLDSSKLSSSIILRKSTGVVKAESAPMFRKDFTVDAN
KTVKSARLYATAAGTYDAYINGKRVTDSVLNPGMTAYDDHMLYQTFDVTDLVKSGDNAIG
VYLGHGWFNRALRGFGSALAFYGKLVVFYTDGTSDVIVSDDSWSFYRYGPIMDDDIFNGF
KYDALIEKSLDGWNEPGFDDSSWDAPAILAANRIVSNGQTPKIIAQNLPLIRPTMSLPAL
SVTEPEEGVYVYDFGQNIAGVVRVTASAPAGTVLKLRHAEILNRENMSGATGEPGTIYTG
NLPRAEATDTYTFRGDKGEETFEPFFTYHGFRYLEITGLDKPLPLEDVTALLLMSDLEQT
SEFDSSNALVNRLYLNSLWSARDNFISVPTDCPQRGERFGWTGDAQIFARTGSYLMDVNA
FYQKYCMDMRDTSTNNRIIADVSPASVGNGWYGQGDRKGATNGWGDAIVIIPYQMYMQYG
NKAVLTENYETMCNWMDYLVSTSENYIRDESWTGDWLPVGEPKSPIALTDTAFCAYSASL
LAEISDILGKPDKAAEYRALYENYRTAWRAKFLTGGEGGKTICGTQTSYVLGIKFGLFDE
DEMAEAAENLTKNIKSRGWHLTTGFLGLSYLNPVLSDTGYSDVAYKLLEQEEYPSWLYSV
TTGSTTIWESWYAFRTYADGSSAANGESYNHFSYGAVSEWLFRYVLGIERDENAVAYKHI
ILKPEFGGSFTHANGSYNSVRGKIESGWTLDKDSGAFTYHTVVPANTTATLYLPAESAES
VVTEGGKPVSESKGVTFVSYKDGAMVYELESGTYDFAVTVDPKANDITSVKLTNAQKIDA
SVTADGKTFTAFPSTFISSQKSVVLNVTTSDENYTFLRFTGEDGKTYKNGEAVSGDNNLN
LLFAYTGKDDGTDGKKTVTLTGVSGVTIAVNGEEKALPYTGSFDKGAEIEIEVLSVPDGY
EFDVIGDARGVGSKVYLKPLADFTAEVAIKTELYRKGYDIFFGFDENVDYWKGGNAAITW
EEGGYMRFKAAQKSDGSFDPRAGYNFTESKSTITGGDYVPASKYESLTIGYIADSVAGDS
RPVMYIATEDQPSYINPVRERGATSKILASYADGKTLREVTYSLSDWSAWTGNIKEIYLD
IIDNVDGDLRVDYILIKRGAIKLTVKTEGLSDAVYTYKGGETVDLSTLAEAAKEGFLGFT
LENGSTDYVTSVTMTDDITLYANYKEVVLPITVFDFEDNTKQGWNVMNGGASSVTDGVYK
VAFDTQKSDAWLYNANLSLDANTLRYVVVKMRHNIPQGATGSKKFEVFFVRTIDTPWQAH
LCASVAQQPASDEFVTYVVDMKNCSYWNGTVNRLRIDPFEVTSPTEGAYTFEIDEIAVTA
PATLILDGGYDGAEKQTLTVPAHVPYDLTALEAPTRTGYTFLGYTDGKSDEILKTVTLTQ
NTTLYAAWEKPNSVVWDFSGGEKQGWNVQNATGSVSDGVFKAAFSTSNADLWFFNTSNIN
IDASVMRYVVVELKHNIPAGSTGSKPFEVFFTRTTDTPWQQHLSANIKQKAAGDFDTYIV
DMKTCTNWNGTVNRLRIDPFEVKSPTEGAYTVEIKSIRVSGEAKLTLVDGESKQVKTIPS
GVTINLADYAKSSEDGREFLGYAETPDGKVIESIAVNREKTLYAVWKTVAPTVSAGSTGV
TATSTAKATLAVALYDADGRLTDSALCEFTGSVEKTYAELGLDLSGVHTVKAYLFDGEAS
KVRPLCEASSYTVR

Enzyme Prediction     

No EC number prediction in MGYG000000366_02096.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	542	1073	1.6e-166	0.998015873015873
CBM67	342	511	2e-34	0.9034090909090909

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	2.13e-113	658	1005	1	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	2.29e-51	361	532	1	169	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592	Bac_rhamnosid	4.59e-32	543	653	1	101	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	6.14e-17	1007	1086	1	76	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam09479	Flg_new	9.27e-05	1699	1746	11	64	Listeria-Bacteroides repeat domain (List_Bact_rpt). This model describes a conserved core region of about 43 residues, which occurs in at least two families of tandem repeats. These include 78-residue repeats which occur from 2 to 15 times in some proteins of Bacteroides forsythus ATCC 43037, and 70-residue repeats found in families of internalins of Listeria species. Single copies are found in proteins of Fibrobacter succinogenes, Geobacter sulfurreducens, and a few other bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
SDT43572.1	2.88e-247	41	1134	6	1064
QUR49864.1	2.48e-235	41	1118	30	1146
QIX66398.1	3.47e-235	41	1114	30	1142
AST53003.1	1.85e-234	41	1114	30	1142
QJE28222.1	1.85e-234	41	1118	30	1146

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3W5M_A	6.36e-186	36	1118	4	1030	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6I60_A	3.59e-127	41	1116	35	939	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
6GSZ_A	6.04e-124	316	1086	99	859	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q82PP4	2.41e-185	36	1118	4	1030	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KNB2	3.20e-126	338	1116	159	920	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03	5.93e-117	352	1123	174	915	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KPL4	9.51e-85	357	1114	191	945	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000611	0.998198	0.000290	0.000441	0.000223	0.000198

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000366_02096.