logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000367_01082

You are here: Home > Sequence: MGYG000000367_01082

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species QAKD01 sp003343965
Lineage Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Anaerovoracaceae; QAKD01; QAKD01 sp003343965
CAZyme ID MGYG000000367_01082
CAZy Family SLH
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
982 104642.26 4.9018
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000367 1764233 MAG Sweden Europe
Gene Location Start: 5602;  End: 8550  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000367_01082.

CAZyme Signature Domains help

Family Start End Evalue family coverage
SLH 35 75 1.1e-16 0.9761904761904762

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
NF033190 inl_like_NEAT_1 2.68e-11 20 200 559 748
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395 SLH 4.98e-11 35 75 1 42
S-layer homology domain.
pfam00395 SLH 1.17e-08 93 134 1 42
S-layer homology domain.
pfam13205 Big_5 2.39e-07 436 523 8 84
Bacterial Ig-like domain.
NF033190 inl_like_NEAT_1 2.60e-06 78 249 567 739
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QOX65054.1 2.23e-182 24 921 43 935
VDN48011.1 5.54e-104 32 741 28 745
QNL44990.1 9.52e-97 28 665 26 664
VDN48012.1 7.69e-80 32 692 29 690
ANX00273.1 5.36e-48 34 377 27 373

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P38536 9.21e-19 21 205 1668 1856
Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
C6CRV0 1.92e-18 21 200 1269 1455
Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
P19424 2.62e-18 30 204 36 214
Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1
P38535 4.42e-17 26 205 899 1082
Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
P38537 2.08e-15 12 231 13 233
Surface-layer 125 kDa protein OS=Lysinibacillus sphaericus OX=1421 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000604 0.998551 0.000237 0.000239 0.000181 0.000161

TMHMM  Annotations      download full data without filtering help

start end
5 27