CAZyme Information: MGYG000000387_00793

Basic Information

• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae
• CAZyme ID: MGYG000000387_00793
• CAZy Family: GH0
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
418	MGYG000000387_9|CGC1	46854.67	4.4657

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000387	2488147	MAG	Sweden	Europe

• Gene Location: Start: 60647; End: 61903 Strand: +

Full Sequence      

MNLQMLQDISGHTGELKIDVQSQENQIPIKNATIQIAYTGEPDKIIEEVSTRNIGSTENI
TLNTPPVEYSLSPGNVQPYSEYNLTISAEGFEKTVISGVELLEGVLSIQNIQLKPFTNQP
DTDRVVIGPHTLYGDYPPKIAEAEVKPVNETGEIVLSRVVVPEYIIVHDGPPSDSSAKNY
YVKYKDYIKNVASSEIYATWPIEAIRANILAIMSFTLNRVYTEWYRNKGYDFTITSSTAY
DHKWIKDRNIFDTISTVTDELYGNYLSRPNVKQPILTQYCDGRRVTCPNWMSQWGSSELG
AQGYDAIDIIRYYYGDNMYINVAEDISGVPSSWPGYNLEIGSSGSKVLQMQEQLNKISTA
YPAIPQITADGIYGEATANAVRIFQKTFGLPQTGVVDYPTWYKISEIYVGVSRIAELT

Enzyme Prediction     

No EC number prediction in MGYG000000387_00793.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam01471	PG_binding_1	2.11e-12	343	404	1	57	Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409	PGRP	6.10e-09	337	404	38	102	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
pfam08486	SpoIID	1.80e-04	186	240	15	68	Stage II sporulation protein. This domain is found in the stage II sporulation protein SpoIID. SpoIID is necessary for membrane migration as well as for some of the earlier steps in engulfment during bacterial endospore formation. The domain is also found in amidase enhancer proteins. Amidases, like SpoIID, are cell wall hydrolases.
COG3409	PGRP	3.29e-04	334	404	117	183	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
TIGR02669	SpoIID_LytB	4.35e-04	176	314	106	260	SpoIID/LytB domain. This model describes a domain found typically in two or three proteins per genome in Cyanobacteria and Firmicutes, and sporadically in other genomes. One member is SpoIID of Bacillus subtilis. Another in B. subtilis is the C-terminal half of LytB, encoded immediately upstream of an amidase, the autolysin LytC, to which its N-terminus is homologous. Gene neighborhoods are not well conserved for members of this family, as many, such as SpoIID, are monocistronic. One early modelling-based study suggests a DNA-binding role for SpoIID, but the function of this domain is unknown. [Unknown function, General]

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QEI32542.1	2.24e-208	14	417	24	429
QHB25032.1	2.24e-208	14	417	24	429
QRT31086.1	1.38e-207	14	417	26	431
QRT50293.1	2.87e-206	14	418	13	419
QUO33025.1	3.73e-204	14	417	12	417

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7RUM_A	3.53e-06	338	404	25	85	ChainA, Endolysin [Salmonella phage GEC_vB_GOT],7RUM_B Chain B, Endolysin [Salmonella phage GEC_vB_GOT]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000046	0.000013	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000387_00793.