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CAZyme Information: MGYG000000391_00478

You are here: Home > Sequence: MGYG000000391_00478

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA11475 sp003538975
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; UBA11475; UBA11475 sp003538975
CAZyme ID MGYG000000391_00478
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1036 118679.4 5.444
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000391 1644097 MAG Sweden Europe
Gene Location Start: 575528;  End: 578638  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000391_00478.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 15 704 3e-57 0.7839805825242718

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 2.54e-09 191 672 401 865
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 4.98e-06 460 561 1 85
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CEP78513.1 7.27e-304 1 1031 1 1033
AJG98234.1 3.50e-290 1 1029 1 1030
AUS98191.1 8.80e-290 1 1029 1 1031
AEF82861.1 6.08e-283 1 1031 1 1035
QCU02329.1 2.00e-266 11 1033 9 1066

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000081 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000391_00478.