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CAZyme Information: MGYG000000393_00388

You are here: Home > Sequence: MGYG000000393_00388

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9;
CAZyme ID MGYG000000393_00388
CAZy Family PL29
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
576 MGYG000000393_27|CGC1 63673.6 4.9473
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000393 2242585 MAG Sweden Europe
Gene Location Start: 10882;  End: 12612  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000393_00388.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL29 81 417 7.7e-81 0.9933554817275747

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16315 DUF4955 4.97e-80 428 575 1 149
Domain of unknown function (DUF4955). This family consists of uncharacterized proteins around 850 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam12708 Pectate_lyase_3 8.01e-07 82 198 3 83
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDM10828.1 4.01e-157 42 576 322 833
QUT78855.1 4.01e-157 42 576 322 833
QNL40303.1 5.66e-157 42 576 322 833
QIU93728.1 9.05e-151 41 572 307 848
CBK67694.1 1.73e-147 42 576 302 852

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000053 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000393_00388.