logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000403_00189

You are here: Home > Sequence: MGYG000000403_00189

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; UBA4716;
CAZyme ID MGYG000000403_00189
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1034 MGYG000000403_24|CGC1 117848.39 4.8878
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000403 2138464 MAG Sweden Europe
Gene Location Start: 31;  End: 3135  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000403_00189.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 15 711 8e-61 0.7839805825242718

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 5.06e-12 191 687 401 873
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 0.002 462 563 1 85
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUS98191.1 0.0 1 1026 1 1031
AJG98234.1 0.0 1 1030 1 1034
CEP78513.1 0.0 1 1028 1 1033
QCU02329.1 0.0 9 1027 7 1062
AEF82861.1 0.0 1 1028 1 1035

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000050 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000403_00189.