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CAZyme Information: MGYG000000404_01840

You are here: Home > Sequence: MGYG000000404_01840

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA11774 sp003507655
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; UBA11774; UBA11774 sp003507655
CAZyme ID MGYG000000404_01840
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
566 64170.88 7.1579
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000404 2228546 MAG Sweden Europe
Gene Location Start: 2593;  End: 4293  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000404_01840.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 262 553 2.1e-32 0.7837837837837838

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd02874 GH18_CFLE_spore_hydrolase 1.54e-54 265 561 13 313
Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in bacterial endospore germination. CFLE is expressed as an inactive preprotein (called SleB) in the forespore compartment of sporulating cells. SleB translocates across the forespore inner membrane and is deposited as a mature enzyme in the cortex layer of the spore. As part of a sensory mechanism capable of initiating germination, CFLE degrades a spore-specific peptidoglycan constituent called muramic-acid delta-lactam that comprises the outer cortex. CFLE has a C-terminal glycosyl hydrolase family 18 (GH18) catalytic domain as well as two N-terminal LysM peptidoglycan-binding domains. In addition to SleB, this family includes YaaH, YdhD, and YvbX from Bacillus subtilis.
COG3858 YaaH 4.01e-36 259 561 107 418
Spore germination protein YaaH [Cell cycle control, cell division, chromosome partitioning].
cd06549 GH18_trifunctional 2.61e-23 252 558 1 298
GH18 domain of an uncharacterized family of bacterial proteins, which share a common three-domain architecture: an N-terminal glycosyl hydrolase family 18 (GH18) domain, a glycosyl transferase family 2 domain, and a C-terminal polysaccharide deacetylase domain.
pfam00704 Glyco_hydro_18 1.96e-15 337 511 88 269
Glycosyl hydrolases family 18.
cd06545 GH18_3CO4_chitinase 1.22e-14 286 463 30 208
The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBL13521.1 7.93e-214 1 566 1 610
CBL10290.1 7.93e-214 1 566 1 610
VCV23980.1 1.59e-213 1 566 1 610
AEN98276.1 1.09e-208 2 566 5 589
CBK92324.1 2.52e-199 1 566 1 577

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O32258 7.05e-27 262 563 26 341
Uncharacterized glycosylase YvbX OS=Bacillus subtilis (strain 168) OX=224308 GN=yvbX PE=3 SV=1
O31682 3.98e-14 275 469 22 214
Putative glycosylase YkvQ OS=Bacillus subtilis (strain 168) OX=224308 GN=ykvQ PE=3 SV=1
C0H404 3.73e-06 519 565 37 83
Probably inactive glycosylase YkzR OS=Bacillus subtilis (strain 168) OX=224308 GN=ykzR PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.636426 0.323187 0.036345 0.000811 0.000508 0.002737

TMHMM  Annotations      download full data without filtering help

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