CAZyme Information: MGYG000000409_00126

Basic Information

• Species: QALS01 sp003150575
• Lineage: Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; QALS01; QALS01 sp003150575
• CAZyme ID: MGYG000000409_00126
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
737		83514.6	5.6771

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000409	2691378	MAG	Sweden	Europe

• Gene Location: Start: 166418; End: 168631 Strand: -

Full Sequence      

MSIFNARWISEKSGCEAPVFRKKFTVRDIKSAVIDICGLGWFELYINGKPASENVFEPAV
ATYEQLNGKHTQYPIRDIFTNPRVYFCRYDITALLKDGENLLSAQLGNGWFNQTRVLNEG
TFYIGVPRLAFSVRIETGKGETLEIESGTDVKAGKSQIVENNVYYGEKHDLHLTDDFHDI
CFSEKNFDCAVEAKRPDGELTLFDYPAEKVIRRIIPKYIGTVNGKKLYDLGENITGRLKF
DTSYGGKIIIEHAEELNPDRTLDFYTVGCKYTPWRIQTFECIGDALPHKDVYAHFTWYGF
RYFTVEGEIENLVCEVIHTDIKRTSDFKCGNEVLNGLYDIYIRTQLNNIHGCVPSDCPHR
ERFGYTGDGQITCETAMHVFDVREMYKKWMRDIIDCQDVNNGHVQHTAPFFGGGGGPSGW
GGAVIVLPYQYYKFYGDDSLVKKYLPNMLHYLSYMESRCENAVVVREENGGWFTGDWAYI
EEGNVDKDGVAYLTPQFVNTCYLIKFYDRLLELDGLLKLGLEREALKRKREAHASAVVEK
YYDEATGDFCRGFLAANAYALDIGLGDERTLNRLVEKYDGAGGFDTGIFGTEILVRVLAE
RRYDDAVFKLLSSRKEKRSFGYMLDSGATTLWEYWDGKESHCHPMFGGCVKTLFTTFLGI
RVASAGYRTVEISPCDIEALGDAEGYITTPRGKISVAIKRRGNRGAVTVELPDGVGGTFR
FRGLEAPLEAGKKVFEF

Enzyme Prediction     

No EC number prediction in MGYG000000409_00126.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	222	718	8.2e-115	0.9841269841269841

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	1.92e-60	322	648	1	331	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	6.58e-27	28	212	2	172	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592	Bac_rhamnosid	3.11e-07	224	323	6	98	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	6.29e-05	659	736	1	78	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AUS97255.1	4.64e-181	1	735	1	722
BCJ98018.1	4.12e-129	2	712	121	849
QOY86540.1	4.95e-112	2	712	128	833
QUT50058.1	2.62e-107	2	712	138	849
QBE96295.1	4.35e-101	2	696	120	807

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6I60_A	9.40e-74	17	712	176	889	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
3W5M_A	2.54e-48	6	712	285	985	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6GSZ_A	1.82e-43	10	695	123	813	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]
2OKX_A	3.81e-09	299	692	504	910	Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KPL4	1.27e-60	14	712	181	897	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1
Q82PP4	1.35e-47	6	712	285	985	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
P9WF03	3.69e-43	21	719	174	876	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KNB2	6.87e-41	21	695	178	852	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000060	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000409_00126.